RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF667Q5HYK9 610 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 MCAMP43121 646 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 VPS39Q96JC1 886 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 HIF1AQ16665 826 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 TJAP1Q5JTD0 557 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 ZNF467Q7Z7K2 595 aaPredicted RBP17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 RHPN2Q8IUC4 686 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 IL1RL2Q9HB29 575 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 TTC26A0AVF1 554 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 KRT17Q04695 432 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 LRRC63Q05C16 580 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 DMC1Q14565 340 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 GLYCTKQ8IVS8 523 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 OR6P1Q8NGX9 317 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 CYGBQ8WWM9 190 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 LGALS16A8MUM7 142 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 IFNAR1P17181 557 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 CATSPER4Q7RTX7 472 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 RHOT2Q8IXI1 618 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 IPO5O00410 1097 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 SEMA3EO15041 775 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 DHX35Q9H5Z1 703 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 TFR2Q9UP52 801 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 H0YC42 278 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 GH2P01242 217 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 PYGBP11216 843 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 GYS1P13807 737 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 OSBPP22059 807 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 IZUMO3Q5VZ72 239 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 HSPBP1Q9NZL4 362 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 STOML1Q9UBI4 398 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 CHORDC1Q9UHD1 332 aaPredicted RBP17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 KCNA2P16389 499 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 PGM1P36871 562 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 MRPL28Q13084 256 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 ANKRD40Q6AI12 368 aa17.84■□□□□ 0.45
TSPAN3-201ENST00000267970 CDC27P30260 824 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 MLH1P40692 756 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 PAPOLAP51003 745 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 ARSEP51690 589 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 TXNRD1Q16881 649 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 FAM95CA0A1B0GW59 222 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 TMEM247A6NEH6 219 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 MEFVO15553 781 aaPredicted RBP17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 GNA15P30679 374 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 NLRP11P59045 1033 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 NECTIN1Q15223 517 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 FAM196AQ6ZSG2 479 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 C4orf33Q8N1A6 199 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 USP33Q8TEY7 942 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 BTN2A2Q8WVV5 523 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 ATP6V1G3Q96LB4 118 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 FAM81BQ96LP2 452 aa17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 INTS2Q9H0H0 1204 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-201ENST00000267970 DYTNA2CJ06 578 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 CLDN3O15551 220 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 ARMCX2Q7L311 632 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 TTC8Q8TAM2 541 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 KPNA7A9QM74 516 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 KRT38O76015 456 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 SERPIND1P05546 499 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 SESN2P58004 480 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 CYFIP2Q96F07 1278 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 KLF6Q99612 283 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 RUBCNLQ9H714 662 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 RHBDL2Q9NX52 303 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 RAD54LQ92698 747 aa17.83■□□□□ 0.44
TSPAN3-201ENST00000267970 CCDC15Q0P6D6 951 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 IFNEQ86WN2 208 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 ARMC2Q8NEN0 867 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 KIFC3Q9BVG8 833 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 MYO1GB0I1T2 1018 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 ENO3P13929 434 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 GCFC2P16383 781 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 ELF1P32519 619 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 ROR1Q01973 937 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 MTMR1Q13613 665 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 CIAO1O76071 339 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 SERPINB2P05120 415 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 CPA2P48052 419 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 TAF1DQ9H5J8 278 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 KIF28PB7ZC32 967 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 XPO1O14980 1071 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 UNC13DQ70J99 1090 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 DENND3A2RUS2 1198 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 CHN1P15882 459 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 TBL3Q12788 808 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 ENAHQ8N8S7 591 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 SPON2Q9BUD6 331 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms