RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 PRELID2Q8N945 189 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 FAM136AQ96C01 138 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 NAP1L3Q99457 506 aaPredicted RBP13.4□□□□□ -0.26
NR1D1-201ENST00000246672 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
NR1D1-201ENST00000246672 PCDHA3Q9Y5H8 950 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 ESYT2A0FGR8 921 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 POTEB3A0JP26 581 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 POTECB2RU33 542 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 ACSL3O95573 720 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
NR1D1-201ENST00000246672 CYP11B2P19099 503 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 STX2P32856 288 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 TSNAXIP1Q2TAA8 658 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 POTEBQ6S5H4 581 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 TXNRD3Q86VQ6 643 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 ENDOVQ8N8Q3 282 aaKnown RBP13.4□□□□□ -0.26
NR1D1-201ENST00000246672 KIFAP3Q92845 792 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 IFT43Q96FT9 208 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 EYA3Q99504 573 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 INTUQ9ULD6 942 aa13.4□□□□□ -0.26
NR1D1-201ENST00000246672 DIS3Q9Y2L1 958 aaKnown RBP13.4□□□□□ -0.26
NR1D1-201ENST00000246672 BRAFP15056 766 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 VCAM1P19320 739 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 CUL3Q13618 768 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 MTFR1Q15390 333 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 TBC1D10AQ9BXI6 508 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 ROPN1BQ9BZX4 212 aaPredicted RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 ROPN1Q9HAT0 212 aaPredicted RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 PCDHA12Q9UN75 941 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 ROBO3Q96MS0 1386 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 PHF2O75151 1096 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 LGR5O75473 907 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 AKAP3O75969 853 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 EPHB2P29323 1055 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 ARHGEF26Q96DR7 871 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 VCXQ9H320 206 aa13.39□□□□□ -0.27
NR1D1-201ENST00000246672 DENND2DQ9H6A0 471 aaPredicted RBP13.39□□□□□ -0.27
NR1D1-201ENST00000246672 SMAPO00193 183 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 BAG3O95817 575 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 CASP4P49662 377 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 SESN3P58005 492 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 ACVR2BQ13705 512 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 TNIP1Q15025 636 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 ARSHQ5FYA8 562 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 SLC30A5Q8TAD4 765 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 SLC7A6OSQ96CW6 309 aaPredicted RBP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 RBM41Q96IZ5 413 aaKnown RBP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 KIAA1683Q9H0B3 1180 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 NMRK1Q9NWW6 199 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 PARP2Q9UGN5 583 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 CHKBQ9Y259 395 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 PTPN22Q9Y2R2 807 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 KIF13BQ9NQT8 1826 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 PODXLO00592 558 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 TAC1P20366 129 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 CHRNA3P32297 505 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 FOXN2P32314 431 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 HOXD13P35453 343 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 ZNF449Q6P9G9 518 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 CCDC137Q6PK04 289 aaKnown RBP13.38□□□□□ -0.27
NR1D1-201ENST00000246672 CEP95Q96GE4 821 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 ZNF333Q96JL9 665 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 FGD4Q96M96 766 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 RUNDC3BQ96NL0 473 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 PPP1R12CQ9BZL4 782 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
NR1D1-201ENST00000246672 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
NR1D1-201ENST00000246672 T-ENOLP0DO92 83 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 ANXA13P27216 316 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 CDK8P49336 464 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 USP4Q13107 963 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 RRP1BQ14684 758 aaKnown RBP13.37□□□□□ -0.27
NR1D1-201ENST00000246672 SETDB1Q15047 1291 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 IRGCQ6NXR0 463 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 CYP4X1Q8N118 509 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
NR1D1-201ENST00000246672 ART4Q93070 314 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 MAGEB18Q96M61 343 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 SERPINB12Q96P63 405 aa13.37□□□□□ -0.27
NR1D1-201ENST00000246672 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms