RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 MYADMQ96S97 322 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 TM6SF1Q9BZW5 370 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 ZMYND12Q9H0C1 365 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
DDX39A-201ENST00000242776 PCDHB2Q9Y5E7 798 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 DOCK6Q96HP0 2047 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 NRP1O14786 923 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 INPPL1O15357 1258 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 SKIP12755 728 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 JAK3P52333 1124 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 PLA2G4FQ68DD2 849 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 AGMOQ6ZNB7 445 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 TEX2Q8IWB9 1127 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 ZNF710Q8N1W2 664 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 GPR152Q8TDT2 470 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 PGBD4Q96DM1 585 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 CYP46A1Q9Y6A2 500 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 TDRD15B5MCY1 1934 aaKnown RBP15.46■□□□□ 0.07
DDX39A-201ENST00000242776 ZNF292O60281 2723 aa15.46■□□□□ 0.07
DDX39A-201ENST00000242776 EDIL3O43854 480 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 ALDH2P05091 517 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 URODP06132 367 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 CIITAP33076 1130 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 OR1G1P47890 313 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 GET4Q7L5D6 327 aaPredicted RBP15.46■□□□□ 0.06
DDX39A-201ENST00000242776 PALB2Q86YC2 1186 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 SLC44A3Q8N4M1 653 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 CCDC12Q8WUD4 166 aaPredicted RBP15.46■□□□□ 0.06
DDX39A-201ENST00000242776 SMG7Q92540 1137 aaKnown RBP15.46■□□□□ 0.06
DDX39A-201ENST00000242776 RSAD1Q9HA92 442 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 PIDD1Q9HB75 910 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 VPS54Q9P1Q0 977 aa15.46■□□□□ 0.06
DDX39A-201ENST00000242776 CLUHO75153 1309 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 MTCL1Q9Y4B5 1905 aaKnown RBP15.45■□□□□ 0.06
DDX39A-201ENST00000242776 COL4A3Q01955 1670 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 F8W810 466 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 TEX28O15482 410 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 GNA11P29992 359 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 SFNP31947 248 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 RAB27AP51159 221 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 AKAP17AQ02040 695 aaKnown RBP15.45■□□□□ 0.06
DDX39A-201ENST00000242776 RABEP1Q15276 862 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 XKR3Q5GH77 459 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 C15orf39Q6ZRI6 1047 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 SLC5A5Q92911 643 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 B3GALT6Q96L58 329 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 INO80BQ9C086 356 aaPredicted RBP15.45■□□□□ 0.06
DDX39A-201ENST00000242776 WNT16Q9UBV4 365 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 MIA3Q5JRA6 1907 aa15.45■□□□□ 0.06
DDX39A-201ENST00000242776 MYH15Q9Y2K3 1946 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 CACNA1IQ9P0X4 2223 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 CACNA1AO00555 2505 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 LILRB3O75022 631 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 LRRN2O75325 713 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 STBD1O95210 358 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 TDP2O95551 362 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 GLUD1P00367 558 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 SRGAP2CP0DJJ0 459 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 RUFY3Q7L099 469 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 ZNF410Q86VK4 478 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 RIT2Q99578 217 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 APOL6Q9BWW8 343 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 SLC26A6Q9BXS9 759 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 NIFKQ9BYG3 293 aaKnown RBP15.44■□□□□ 0.06
DDX39A-201ENST00000242776 FOXQ1Q9C009 403 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 WDR6Q9NNW5 1121 aaKnown RBP15.44■□□□□ 0.06
DDX39A-201ENST00000242776 MARCH5Q9NX47 278 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 DNAH14Q0VDD8 3507 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 FANCMQ8IYD8 2048 aa15.44■□□□□ 0.06
DDX39A-201ENST00000242776 POTEMA6NI47 508 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 ZNF623O75123 536 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 FRYLO94915 3013 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 SOD2P04179 222 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 ADH1AP07327 375 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 SP9P0CG40 484 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 NPEPPSP55786 919 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 NONOQ15233 471 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■■□□ 16.3
DDX39A-201ENST00000242776 POTEGQ6S5H5 508 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 Q6ZUG5 572 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
DDX39A-201ENST00000242776 RABGGTAQ92696 567 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 STAMQ92783 540 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 BRF1Q92994 677 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 TMEM143Q96AN5 459 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 HERC2P3Q9BVR0 1158 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 AGPAT5Q9NUQ2 364 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 SIT1Q9Y3P8 196 aa15.43■□□□□ 0.06
DDX39A-201ENST00000242776 IGKV6-21A0A0C4DH24 114 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 CARNS1A5YM72 827 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 PRPF3O43395 683 aaKnown RBP15.42■□□□□ 0.06
DDX39A-201ENST00000242776 MAFO75444 373 aaPredicted RBP15.42■□□□□ 0.06
DDX39A-201ENST00000242776 PSMD10O75832 226 aa15.42■□□□□ 0.06
DDX39A-201ENST00000242776 SRFP11831 508 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms