RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C PRS1P32895 427 aaKnown RBP2.54□□□□□ -2
RPC40YPR110C COS9P36034 407 aa2.54□□□□□ -2
RPC40YPR110C MRPL40P36534 297 aa2.54□□□□□ -2
RPC40YPR110C SOL2P37262 315 aa2.54□□□□□ -2
RPC40YPR110C SHE3P38272 425 aaKnown RBP2.54□□□□□ -2
RPC40YPR110C BMT2P38278 337 aa2.54□□□□□ -2
RPC40YPR110C YNL320WP42840 284 aa2.54□□□□□ -2
RPC40YPR110C LOH1P47055 219 aa2.54□□□□□ -2
RPC40YPR110C YJR054WP47114 497 aa2.54□□□□□ -2
RPC40YPR110C RIB4P50861 169 aaPredicted RBP2.54□□□□□ -2
RPC40YPR110C SCS7Q03529 384 aa2.54□□□□□ -2
RPC40YPR110C FAR10Q06001 478 aa2.54□□□□□ -2
RPC40YPR110C RPN8Q08723 338 aaKnown RBP2.54□□□□□ -2
RPC40YPR110C DDC1Q08949 612 aa2.54□□□□□ -2
RPC40YPR110C TAF10Q12030 206 aa2.54□□□□□ -2
RPC40YPR110C DCP1Q12517 231 aaPredicted RBP2.54□□□□□ -2
RPC40YPR110C SAR1P20606 190 aaKnown RBP2.53□□□□□ -2
RPC40YPR110C CMK2P22517 447 aa2.53□□□□□ -2
RPC40YPR110C BUD2P33314 1104 aa2.53□□□□□ -2
RPC40YPR110C EBP2P36049 427 aaKnown RBP2.53□□□□□ -2
RPC40YPR110C YKL162CP36052 402 aa2.53□□□□□ -2
RPC40YPR110C SMF2P38778 549 aa2.53□□□□□ -2
RPC40YPR110C CHL4P38907 458 aa2.53□□□□□ -2
RPC40YPR110C YFL040WP43562 540 aa2.53□□□□□ -2
RPC40YPR110C PGU1P47180 361 aa2.53□□□□□ -2
RPC40YPR110C GPI8P49018 411 aa2.53□□□□□ -2
RPC40YPR110C YPS5P53057 165 aa2.53□□□□□ -2
RPC40YPR110C VOA1P53262 265 aa2.53□□□□□ -2
RPC40YPR110C YGR168CP53293 376 aa2.53□□□□□ -2
RPC40YPR110C MKC7P53379 596 aa2.53□□□□□ -2
RPC40YPR110C HAL1Q01766 294 aa2.53□□□□□ -2
RPC40YPR110C ADD37Q03233 198 aa2.53□□□□□ -2
RPC40YPR110C UBX2Q04228 584 aa2.53□□□□□ -2
RPC40YPR110C ECM18Q04623 453 aa2.53□□□□□ -2
RPC40YPR110C BUR2Q05949 395 aa2.53□□□□□ -2
RPC40YPR110C RRG8Q06109 277 aa2.53□□□□□ -2
RPC40YPR110C VAC14Q06708 880 aa2.53□□□□□ -2
RPC40YPR110C YLR012CQ07927 99 aa2.53□□□□□ -2
RPC40YPR110C USO1P25386 1790 aa2.53□□□□□ -2
RPC40YPR110C HAP1P0CE41 1502 aa2.52□□□□□ -2.01
RPC40YPR110C PDR11P40550 1411 aa2.52□□□□□ -2.01
RPC40YPR110C REP1P03871 373 aa2.52□□□□□ -2.01
RPC40YPR110C CBP6P07253 162 aaPredicted RBP2.52□□□□□ -2.01
RPC40YPR110C PCL1P24867 279 aa2.52□□□□□ -2.01
RPC40YPR110C ITR2P30606 609 aa2.52□□□□□ -2.01
RPC40YPR110C ECT1P33412 323 aa2.52□□□□□ -2.01
RPC40YPR110C MRPL27P36526 146 aaPredicted RBP2.52□□□□□ -2.01
RPC40YPR110C VPS45P38932 577 aa2.52□□□□□ -2.01
RPC40YPR110C FET3P38993 636 aa2.52□□□□□ -2.01
RPC40YPR110C PEX22P39718 180 aa2.52□□□□□ -2.01
RPC40YPR110C PMT4P46971 762 aa2.52□□□□□ -2.01
RPC40YPR110C CDH1P53197 566 aa2.52□□□□□ -2.01
RPC40YPR110C OKP1P53298 406 aa2.52□□□□□ -2.01
RPC40YPR110C HCH1P53834 153 aa2.52□□□□□ -2.01
RPC40YPR110C RNH201P53942 307 aa2.52□□□□□ -2.01
RPC40YPR110C MRPS16Q02608 121 aa2.52□□□□□ -2.01
RPC40YPR110C SPO19Q03029 223 aa2.52□□□□□ -2.01
RPC40YPR110C RDL2Q08742 149 aaKnown RBP2.52□□□□□ -2.01
RPC40YPR110C LDB17Q12342 491 aa2.52□□□□□ -2.01
RPC40YPR110C PRM4Q12498 284 aa2.52□□□□□ -2.01
RPC40YPR110C YIL002W-AQ3E7Z5 69 aa2.52□□□□□ -2.01
RPC40YPR110C NUP192P47054 1683 aa2.52□□□□□ -2.01
RPC40YPR110C SOD1P00445 154 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C RPS14AP06367 137 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C CAR2P07991 424 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C URA10P30402 227 aa2.51□□□□□ -2.01
RPC40YPR110C IES6P32617 166 aa2.51□□□□□ -2.01
RPC40YPR110C UTH1P36135 365 aa2.51□□□□□ -2.01
RPC40YPR110C RPS14BP39516 138 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C TPS1Q00764 495 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C APC4Q04601 652 aa2.51□□□□□ -2.01
RPC40YPR110C DTD1Q07648 150 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C SLF1Q12034 447 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C RPL21BQ12672 160 aaKnown RBP2.51□□□□□ -2.01
RPC40YPR110C FOL3Q12676 427 aaPredicted RBP2.51□□□□□ -2.01
RPC40YPR110C CTA1P15202 515 aa2.5□□□□□ -2.01
RPC40YPR110C UGA1P17649 471 aa2.5□□□□□ -2.01
RPC40YPR110C RPL5P26321 297 aaKnown RBP2.5□□□□□ -2.01
RPC40YPR110C MEI5P32489 222 aa2.5□□□□□ -2.01
RPC40YPR110C PDC2P32896 925 aa2.5□□□□□ -2.01
RPC40YPR110C YBR241CP38142 488 aa2.5□□□□□ -2.01
RPC40YPR110C EFM1P38732 585 aa2.5□□□□□ -2.01
RPC40YPR110C YAP3P38749 330 aa2.5□□□□□ -2.01
RPC40YPR110C YHR035WP38769 630 aa2.5□□□□□ -2.01
RPC40YPR110C COX16P47081 118 aa2.5□□□□□ -2.01
RPC40YPR110C BIO3P50277 480 aa2.5□□□□□ -2.01
RPC40YPR110C EGD1Q02642 157 aaKnown RBP2.5□□□□□ -2.01
RPC40YPR110C RMI1Q02685 241 aa2.5□□□□□ -2.01
RPC40YPR110C YDR115WQ04598 105 aa2.5□□□□□ -2.01
RPC40YPR110C ERV41Q04651 352 aa2.5□□□□□ -2.01
RPC40YPR110C MRX9Q07349 420 aaKnown RBP2.5□□□□□ -2.01
RPC40YPR110C YOR376WQ08900 122 aa2.5□□□□□ -2.01
RPC40YPR110C SAM4Q08985 325 aaKnown RBP2.5□□□□□ -2.01
RPC40YPR110C PFK27Q12471 397 aaPredicted RBP2.5□□□□□ -2.01
RPC40YPR110C TY1B-NL2Q99337 1749 aaKnown RBP2.5□□□□□ -2.01
RPC40YPR110C TPI1P00942 248 aaKnown RBP2.49□□□□□ -2.01
RPC40YPR110C RAD23P32628 398 aaKnown RBP2.49□□□□□ -2.01
RPC40YPR110C KTI12P34253 313 aaKnown RBP2.49□□□□□ -2.01
RPC40YPR110C RPC25P35718 212 aa2.49□□□□□ -2.01
RPC40YPR110C YKL071WP36086 256 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms