RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX1	YGR193C	COA4	Q05809	96 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	BUR2	Q05949	395 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	PRP11	Q07350	266 aa	Predicted RBP	3.37	□□□□□ -1.87
PDX1	YGR193C	ALE1	Q08548	619 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	GEP3	Q08622	556 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	POM33	Q12164	279 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	RRD2	Q12461	358 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	YIR021W-A	Q3E739	70 aa		3.37	□□□□□ -1.87
PDX1	YGR193C	REV3	P14284	1504 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	ADH2	P00331	348 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	GDH1	P07262	454 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	SPS4	P09937	338 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	ERG11	P10614	530 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	MRP1	P10662	321 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	PYC1	P11154	1178 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	HXT2	P23585	541 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	PPH22	P23595	377 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	GPI12	P23797	304 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	PTC6	P25646	442 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	PPZ1	P26570	692 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	PMT2	P31382	759 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	RNP1	P32385	249 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	UGX2	P32772	223 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	RGT1	P32862	1170 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	YKR051W	P36142	418 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	MRPL24	P36525	258 aa	Predicted RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	ECM31	P38122	312 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	VBA2	P38358	474 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	YPT31	P38555	223 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	ATG7	P38862	630 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	YJL193W	P39542	402 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	YIL067C	P40514	678 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	CIN2	P46670	268 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	CTR1	P49573	406 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	SOL1	P50278	321 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	PUS2	P53167	370 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	RSM27	P53305	110 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	NRK1	P53915	240 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	IMP4	P53941	290 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	UBC7	Q02159	165 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	ELP3	Q02908	557 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	YPL113C	Q02961	396 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	GIP3	Q03016	1276 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	AIM34	Q03673	198 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	PKR1	Q03880	122 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	DPP1	Q05521	289 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	TMA16	Q08687	178 aa		3.36	□□□□□ -1.87
PDX1	YGR193C	SAM4	Q08985	325 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	YLR050C	Q12155	161 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	USB1	Q12208	290 aa	Known RBP	3.36	□□□□□ -1.87
PDX1	YGR193C	DIF1	O13577	133 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	RPL18A	P0CX49	186 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	RPL18B	P0CX50	186 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
PDX1	YGR193C	CPT1	P17898	393 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	PRE1	P22141	198 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	URE2	P23202	354 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	KIN82	P25341	720 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	EHD3	P28817	500 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	CAT2	P32796	670 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	SGE1	P33335	543 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	LHP1	P33399	275 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	SHP1	P34223	423 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	CBP4	P37267	147 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	RTC2	P38279	296 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YHR033W	P38690	423 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	LEU5	P38702	357 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	GOS1	P38736	223 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	CRG1	P38892	291 aa	RIP-Chip data	3.35	□□□□□ -1.87	not detected
PDX1	YGR193C	VMA7	P39111	118 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	RFC2	P40348	353 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	COA1	P40452	197 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	BUD8	P41698	603 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	CTK2	P46962	323 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YJL016W	P47072	561 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	STR3	P53101	465 aa	Known RBP	3.35	□□□□□ -1.87
PDX1	YGR193C	COG7	P53195	279 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YPR003C	P53394	754 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	COS1	P53822	381 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	CAF40	P53829	373 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	IBD2	P53892	351 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	APS2	Q00381	147 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	NRG1	Q03125	231 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YDR249C	Q03787	373 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YDR391C	Q04170	232 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	GMC1	Q04399	608 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YDR109C	Q04585	715 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YDR124W	Q04608	324 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YDR278C	Q05612	105 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	TPO3	Q06451	622 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	PLB3	Q08108	686 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YPL257W	Q08974	193 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	ATP14	Q12349	124 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	YOR012W	Q12351	137 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	JLP1	Q12358	412 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	RDI1	Q12434	202 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	PSK1	P31374	1356 aa		3.35	□□□□□ -1.87
PDX1	YGR193C	XRN1	P22147	1528 aa	Known RBP	3.34	□□□□□ -1.87
PDX1	YGR193C	URA3	P03962	267 aa		3.34	□□□□□ -1.87
PDX1	YGR193C	HAP2	P06774	265 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms