RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 RTN2O75298 545 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 ZBED1O96006 694 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 GNA15P30679 374 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 PDE1BQ01064 536 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 NNTQ13423 1086 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 RPS6KA2Q15349 733 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 PHLDB3Q6NSJ2 640 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 SYDE1Q6ZW31 735 aaPredicted RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 C7orf31Q8N865 590 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 NUP85Q9BW27 656 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 CACYBPQ9HB71 228 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 AFG3L2Q9Y4W6 797 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 RASGRF2O14827 1237 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 P4HA2O15460 535 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 HUS1O60921 280 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 KRT7P08729 469 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 FDPSP14324 419 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 THOC5Q13769 683 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 TMED2Q15363 201 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 HAUS6Q7Z4H7 955 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 CCNYQ8ND76 341 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 FBXL13Q8NEE6 735 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 OSBPL9Q96SU4 736 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 VPS33BQ9H267 617 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 JMJD4Q9H9V9 463 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 AGO2Q9UKV8 859 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 PRR12Q9ULL5 1215 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 SIGLEC1Q9BZZ2 1709 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 KRT3P12035 628 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 PAMP19021 973 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 BASP1P80723 227 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 IQCB1Q15051 598 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 STILQ15468 1287 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 RHPN2Q8IUC4 686 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 GMCL1P1Q8NEA9 526 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 DEPDC1BQ8WUY9 529 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 ZNF560Q96MR9 790 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 PARVAQ9NVD7 372 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
PDE4D-228ENST00000636120 MRFAP1Q9Y605 127 aa6.92□□□□□ -1.3
PDE4D-228ENST00000636120 SSU72P8A0A1W2PR75 194 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 TTC26A0AVF1 554 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 PSMD14O00487 310 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 MT-ND3P03897 115 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 DHX34Q14147 1143 aaKnown RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 NR1I3Q14994 352 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 GCNAQ96QF7 691 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 MXRA8Q9BRK3 442 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 KATNAL1Q9BW62 490 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 AP1M1Q9BXS5 423 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ABCB6Q9NP58 842 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 MYOZ2Q9NPC6 264 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 RBAKQ9NYW8 714 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 CNOT7Q9UIV1 285 aaKnown RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ASAP2O43150 1006 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ZFXP17010 805 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ARL4CP56559 192 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 TSPY1Q01534 308 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 TMEM270Q6UE05 265 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 THNSL1Q8IYQ7 743 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 PDIK1LQ8N165 341 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 SYN2Q92777 582 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 AGPAT1Q99943 283 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 MKNK1Q9BUB5 465 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 STK33Q9BYT3 514 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 EXOC1LA0A1B0GW35 172 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 IL1R1P14778 569 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 DYNLT1P63172 113 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 RAPH1Q70E73 1250 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 PNMA8AQ86V59 439 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 HSPH1Q92598 858 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 PPP1R12CQ9BZL4 782 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 EMSYQ7Z589 1322 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ZRANB2O95218 330 aaKnown RBP eCLIP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 NFKBIAP25963 317 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 PPARGP37231 505 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 FKBP1AP62942 108 aaKnown RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 SNAPC2Q13487 334 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 DUOXA2Q1HG44 320 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 KLHL38Q2WGJ6 581 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ATG16L1Q676U5 607 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 OTUD5Q96G74 571 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ZDHHC15Q96MV8 337 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 SMARCAD1Q9H4L7 1026 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ZWILCHQ9H900 591 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 ACTR5Q9H9F9 607 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-228ENST00000636120 FOXN1O15353 648 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 IL18RAPO95256 599 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 NR1D1P20393 614 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 NXNQ6DKJ4 435 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 RHOT1Q8IXI2 618 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 PYROXD1Q8WU10 500 aa6.91□□□□□ -1.3
PDE4D-228ENST00000636120 KAZALD1Q96I82 304 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms