RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ANKEF1Q9NU02 776 aa19.14■□□□□ 0.65
HMGN3-203ENST00000620514 AGPAT5Q9NUQ2 364 aa19.14■□□□□ 0.65
HMGN3-203ENST00000620514 FAM105AQ9NUU6 356 aa19.14■□□□□ 0.65
HMGN3-203ENST00000620514 GAS2O43903 313 aaKnown RBP19.13■□□□□ 0.65
HMGN3-203ENST00000620514 SPATA31C1P0DKV0 1188 aa19.13■□□□□ 0.65
HMGN3-203ENST00000620514 RABEP1Q15276 862 aa19.13■□□□□ 0.65
HMGN3-203ENST00000620514 SRGAP1Q7Z6B7 1085 aa19.13■□□□□ 0.65
HMGN3-203ENST00000620514 ASAP3Q8TDY4 903 aa19.13■□□□□ 0.65
HMGN3-203ENST00000620514 PPP2R3CQ969Q6 453 aa19.13■□□□□ 0.65
HMGN3-203ENST00000620514 ZNF558Q96NG5 402 aa19.13■□□□□ 0.65
HMGN3-203ENST00000620514 FSCN2O14926 492 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 PER2O15055 1255 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 ASAP2O43150 1006 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 MED24O75448 989 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 TECP42680 631 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 RARRES1P49788 294 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 PLCB3Q01970 1234 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 NBR1Q14596 966 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 TTC38Q5R3I4 469 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 NOSTRINQ8IVI9 506 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 EFHBQ8N7U6 833 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 MRPS27Q92552 414 aaKnown RBP19.12■□□□□ 0.65
HMGN3-203ENST00000620514 EPHX3Q9H6B9 360 aa19.12■□□□□ 0.65
HMGN3-203ENST00000620514 ZNF623O75123 536 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 DGAT1O75907 488 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 GLP2RO95838 553 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 OR52Z1P0C646 297 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 SKIP12755 728 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 HOXA11P31270 313 aaPredicted RBP19.11■□□□□ 0.65
HMGN3-203ENST00000620514 NDUFV1P49821 464 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 RBM10P98175 930 aaKnown RBP19.11■□□□□ 0.65
HMGN3-203ENST00000620514 GNL2Q13823 731 aaKnown RBP19.11■□□□□ 0.65
HMGN3-203ENST00000620514 UBXN11Q5T124 520 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 PLPP4Q5VZY2 271 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 CATSPER3Q86XQ3 398 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 TLE6Q9H808 572 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 SPG21Q9NZD8 308 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 CLEC1BQ9P126 229 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 LZTS1Q9Y250 596 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 INPP5FQ9Y2H2 1132 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 PCDHB2Q9Y5E7 798 aa19.11■□□□□ 0.65
HMGN3-203ENST00000620514 NT5C1B-RDH14C9J2C7 533 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 MBTPS2O43462 519 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 USO1O60763 962 aaKnown RBP19.1■□□□□ 0.65
HMGN3-203ENST00000620514 OFD1O75665 1012 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 CD2BP2O95400 341 aaKnown RBP19.1■□□□□ 0.65
HMGN3-203ENST00000620514 ARL2P36404 184 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 RAB27AP51159 221 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 BCAR1P56945 870 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 PTENP60484 403 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 CAPSQ13938 189 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 GJD3Q8N144 294 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 SLC39A11Q8N1S5 342 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 MSLNLQ96KJ4 702 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 CCDC43Q96MW1 224 aaKnown RBP19.1■□□□□ 0.65
HMGN3-203ENST00000620514 MRPL9Q9BYD2 267 aaKnown RBP19.1■□□□□ 0.65
HMGN3-203ENST00000620514 TUFT1Q9NNX1 390 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 CD207Q9UJ71 328 aa19.1■□□□□ 0.65
HMGN3-203ENST00000620514 BARX2Q9UMQ3 279 aaPredicted RBP19.1■□□□□ 0.65
HMGN3-203ENST00000620514 GLRA2P23416 452 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 SSTR3P32745 418 aaPredicted RBP19.09■□□□□ 0.65
HMGN3-203ENST00000620514 PPM1AP35813 382 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 ORC2Q13416 577 aaPredicted RBP19.09■□□□□ 0.65
HMGN3-203ENST00000620514 MXD4Q14582 209 aaPredicted RBP19.09■□□□□ 0.65
HMGN3-203ENST00000620514 DUSP6Q16828 381 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 NOMO2Q5JPE7 1267 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 POTEGQ6S5H5 508 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 GLB1LQ6UWU2 654 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 AGMOQ6ZNB7 445 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 MAEAQ7L5Y9 396 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 C4orf32Q8N8J7 132 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 VN1R2Q8NFZ6 395 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 TCF25Q9BQ70 676 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 POLR3CQ9BUI4 534 aaPredicted RBP19.09■□□□□ 0.65
HMGN3-203ENST00000620514 POLR3FQ9H1D9 316 aaPredicted RBP19.09■□□□□ 0.65
HMGN3-203ENST00000620514 NRDE2Q9H7Z3 1164 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 GPRC5CQ9NQ84 441 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 ENTPD7Q9NQZ7 604 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
HMGN3-203ENST00000620514 PUF60Q9UHX1 559 aaKnown RBP19.09■□□□□ 0.65
HMGN3-203ENST00000620514 HIDE1A8MVS5 230 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 INO80B-WBP1J3KQ70 363 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 ST18O60284 1047 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 B4GALT3O60512 393 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 TSPAN1O60635 241 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 ZC3H11AO75152 810 aaKnown RBP eCLIP19.08■□□□□ 0.644e-6■■□□□ 12.4
HMGN3-203ENST00000620514 ERLIN2O94905 339 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 XRCC6P12956 609 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 U2AF2P26368 475 aaKnown RBP eCLIP19.08■□□□□ 0.642e-11■■■■■ 34.4
HMGN3-203ENST00000620514 TRAPPC10P48553 1259 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 TOB1P50616 345 aaPredicted RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 AFF1P51825 1210 aaKnown RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 KRT17Q04695 432 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 ZP2Q05996 745 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 MBTD1Q05BQ5 628 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 SMAD4Q13485 552 aaKnown RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 TFDP1Q14186 410 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 SMAD2Q15796 467 aaKnown RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 PDE12Q6L8Q7 609 aaKnown RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 MRPL10Q7Z7H8 261 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms