RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 MARCH6O60337 910 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 DKC1O60832 514 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMN2-213ENST00000614240 GIT2Q14161 759 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 B3GNT9Q6UX72 402 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 ANO5Q75V66 913 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 DDX53Q86TM3 631 aaKnown RBP20.01■□□□□ 0.79
SMN2-213ENST00000614240 FAM177A1Q8N128 213 aaPredicted RBP20.01■□□□□ 0.79
SMN2-213ENST00000614240 KREMEN2Q8NCW0 462 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 AUTS2Q8WXX7 1259 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 SLC7A3Q8WY07 619 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 IGSF21Q96ID5 467 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 AIFM3Q96NN9 605 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 POMKQ9H5K3 350 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 CYP26B1Q9NR63 512 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 TBC1D13Q9NVG8 400 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 DZANK1Q9NVP4 752 aa20.01■□□□□ 0.79
SMN2-213ENST00000614240 SPDYE4A6NLX3 237 aa20■□□□□ 0.79
SMN2-213ENST00000614240 M0R2N6 131 aa20■□□□□ 0.79
SMN2-213ENST00000614240 WEE2P0C1S8 567 aa20■□□□□ 0.79
SMN2-213ENST00000614240 AVPR2P30518 371 aa20■□□□□ 0.79
SMN2-213ENST00000614240 QARSP47897 775 aaKnown RBP20■□□□□ 0.79
SMN2-213ENST00000614240 POLGP54098 1239 aaPredicted RBP20■□□□□ 0.79
SMN2-213ENST00000614240 VCPP55072 806 aaKnown RBP20■□□□□ 0.79
SMN2-213ENST00000614240 MTMR3Q13615 1198 aa20■□□□□ 0.79
SMN2-213ENST00000614240 ATAT1Q5SQI0 421 aa20■□□□□ 0.79
SMN2-213ENST00000614240 EXOC8Q8IYI6 725 aa20■□□□□ 0.79
SMN2-213ENST00000614240 C12orf76Q8N812 135 aaPredicted RBP20■□□□□ 0.79
SMN2-213ENST00000614240 URGCPQ8TCY9 931 aa20■□□□□ 0.79
SMN2-213ENST00000614240 CEP170P1Q96L14 293 aa20■□□□□ 0.79
SMN2-213ENST00000614240 MBOAT7Q96N66 472 aa20■□□□□ 0.79
SMN2-213ENST00000614240 PHOX2BQ99453 314 aa20■□□□□ 0.79
SMN2-213ENST00000614240 ZBP1Q9H171 429 aa20■□□□□ 0.79
SMN2-213ENST00000614240 NRDE2Q9H7Z3 1164 aa20■□□□□ 0.79
SMN2-213ENST00000614240 PDRG1Q9NUG6 133 aa20■□□□□ 0.79
SMN2-213ENST00000614240 KCNJ14Q9UNX9 436 aa20■□□□□ 0.79
SMN2-213ENST00000614240 C2CD4DB7Z1M9 353 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 EML1O00423 815 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 SLC37A4O43826 429 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 ZNF623O75123 536 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 OFD1O75665 1012 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 GALTP07902 379 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 SRGAP2CP0DJJ0 459 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 CTSAP10619 480 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 XBP1P17861 261 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 NPEPPSP55786 919 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 TMEM173Q86WV6 379 aaPredicted RBP19.99■□□□□ 0.79
SMN2-213ENST00000614240 FAM20AQ96MK3 541 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 FAM193BQ96PV7 902 aaPredicted RBP19.99■□□□□ 0.79
SMN2-213ENST00000614240 DBR1Q9UK59 544 aaKnown RBP19.99■□□□□ 0.79
SMN2-213ENST00000614240 SORCS3Q9UPU3 1222 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 PCDHB2Q9Y5E7 798 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 COL4A3BPQ9Y5P4 624 aa19.99■□□□□ 0.79
SMN2-213ENST00000614240 MEIS3P2A8K0S8 358 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 EPB41L2O43491 1005 aaKnown RBP19.98■□□□□ 0.79
SMN2-213ENST00000614240 CDKL5O76039 1030 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 TCF15Q12870 199 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 PPP2R5CQ13362 524 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 NPY5RQ15761 445 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 NEK8Q86SG6 692 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 CABP7Q86V35 215 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 UBALD2Q8IYN6 164 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 TDRD5Q8NAT2 981 aaKnown RBP19.98■□□□□ 0.79
SMN2-213ENST00000614240 PSPC1Q8WXF1 523 aaKnown RBP19.98■□□□□ 0.79
SMN2-213ENST00000614240 TMEM143Q96AN5 459 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 IRF2BPLQ9H1B7 796 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 DNAJB4Q9UDY4 337 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 C5orf42Q9H799 3197 aa19.98■□□□□ 0.79
SMN2-213ENST00000614240 SSBP05455 408 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMN2-213ENST00000614240 P4HBP07237 508 aaKnown RBP19.97■□□□□ 0.79
SMN2-213ENST00000614240 GCFC2P16383 781 aaKnown RBP19.97■□□□□ 0.79
SMN2-213ENST00000614240 EPCAMP16422 314 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 RFC5P40937 340 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 SLC11A1P49279 550 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 KANK3Q6NY19 840 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 SRGAP1Q7Z6B7 1085 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 PPFIBP1Q86W92 1011 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 PRPF31Q8WWY3 499 aaKnown RBP19.97■□□□□ 0.79
SMN2-213ENST00000614240 EMILIN2Q9BXX0 1053 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 TM6SF1Q9BZW5 370 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 IFT122Q9HBG6 1241 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 BMP2KQ9NSY1 1161 aaPredicted RBP19.97■□□□□ 0.79
SMN2-213ENST00000614240 AGPAT5Q9NUQ2 364 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 IRAK3Q9Y616 596 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 WDR81Q562E7 1941 aa19.97■□□□□ 0.79
SMN2-213ENST00000614240 CCNT1O60563 726 aaKnown RBP19.96■□□□□ 0.79
SMN2-213ENST00000614240 PDGFBP01127 241 aaPredicted RBP19.96■□□□□ 0.79
SMN2-213ENST00000614240 KLRC2P26717 231 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 KIAA1841Q6NSI8 718 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 OTUD6AQ7L8S5 288 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 ZNF280BQ86YH2 543 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 PLCD3Q8N3E9 789 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 ZNF579Q8NAF0 562 aaKnown RBP19.96■□□□□ 0.79
SMN2-213ENST00000614240 SLC22A17Q8WUG5 538 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 BCL7CQ8WUZ0 217 aaPredicted RBP19.96■□□□□ 0.79
SMN2-213ENST00000614240 ATOH1Q92858 354 aaPredicted RBP19.96■□□□□ 0.79
SMN2-213ENST00000614240 NAP1L4Q99733 375 aaKnown RBP19.96■□□□□ 0.79
SMN2-213ENST00000614240 PHF20Q9BVI0 1012 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 RSAD1Q9HA92 442 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 KANSL3Q9P2N6 904 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 STK39Q9UEW8 545 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms