RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MB21D2Q8IYB1 491 aaPredicted RBP18.53■□□□□ 0.56
HMGXB3-206ENST00000613459 PPCSQ9HAB8 311 aa18.53■□□□□ 0.56
HMGXB3-206ENST00000613459 ABCA8O94911 1581 aa18.53■□□□□ 0.56
HMGXB3-206ENST00000613459 SDC4P31431 198 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 MAGOHP61326 146 aaKnown RBP18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 FAM83BQ5T0W9 1011 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 YIPF3Q9GZM5 350 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 ARHGEF9O43307 516 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 SYF2O95926 243 aaKnown RBP18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 SERPINB4P48594 390 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 PI16Q6UXB8 463 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 CATSPER1Q8NEC5 780 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 ATP6V1G3Q96LB4 118 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 UTYO14607 1347 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 H3BRJ5 948 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 VAMP7P51809 220 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 MORF4L2Q15014 288 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 TRIM59Q8IWR1 403 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 TMEM47Q9BQJ4 181 aa18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 INTS2Q9H0H0 1204 aaKnown RBP18.52■□□□□ 0.56
HMGXB3-206ENST00000613459 SYCE1LA8MT33 242 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 HUS1O60921 280 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC1A1P43005 524 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 FRMD5Q7Z6J6 570 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 FSD1LQ9BXM9 530 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 ROBO2Q9HCK4 1378 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 USP11P51784 963 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 TSPY1Q01534 308 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 ARID5BQ14865 1188 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 NSUN6Q8TEA1 469 aaKnown RBP18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 AIFM3Q96NN9 605 aa18.52■□□□□ 0.55
HMGXB3-206ENST00000613459 PRCPP42785 496 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 ING2Q9H160 280 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 RFFLQ8WZ73 363 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 NLRP4Q96MN2 994 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC16A3O15427 465 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 NUP85Q9BW27 656 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 MRGBPQ9NV56 204 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 HPCAL4Q9UM19 191 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 H0Y3Z8 333 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 HOXA13P31271 388 aaPredicted RBP18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 SUSD4Q5VX71 490 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 RWDD4Q6NW29 188 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 ICA1LQ8NDH6 482 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 IFT43Q96FT9 208 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 BARHL2Q9NY43 387 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 ADGRG1Q9Y653 693 aa18.51■□□□□ 0.55
HMGXB3-206ENST00000613459 OSTNP61366 133 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 TBC1D10CQ8IV04 446 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 NCLNQ969V3 563 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 TGS1Q96RS0 853 aaKnown RBP18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 CYP2E1P05181 493 aaPredicted RBP18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 PYGLP06737 847 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 ARFIP2P53365 341 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 ZNF341Q9BYN7 854 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC4A1P02730 911 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 RECQLP46063 649 aaPredicted RBP18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 PCYT1AP49585 367 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 STAT4Q14765 748 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 DTNBP1Q96EV8 351 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 LY9Q9HBG7 655 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 WARS2Q9UGM6 360 aaKnown RBP18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 MAGED2Q9UNF1 606 aaPredicted RBP18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 RASSF10A6NK89 507 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 ORC4O43929 436 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 CDO1Q16878 200 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 SGMS1Q86VZ5 419 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 NEDD4P46934 1319 aa18.5■□□□□ 0.55
HMGXB3-206ENST00000613459 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 QARSP47897 775 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 OR9Q1Q8NGQ5 310 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 SNX19Q92543 992 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 BFARQ9NZS9 450 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 PPP6R3Q5H9R7 873 aaPredicted RBP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 ZBTB41Q5SVQ8 909 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 HIPK4Q8NE63 616 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 ZCCHC17Q9NP64 241 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 MRFAP1Q9Y605 127 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 PALLDQ8WX93 1383 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 SRGAP2O75044 1071 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 PDHA1P08559 390 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 NEK2P51955 445 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 ROR1Q01973 937 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 EFTUD2Q15029 972 aaKnown RBP eCLIP18.49■□□□□ 0.551e-7■■■■□ 23.5
HMGXB3-206ENST00000613459 SRLQ86TD4 932 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 BTBD6Q96KE9 485 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 ASPSCR1Q9BZE9 553 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 HEATR6Q6AI08 1181 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 SH3RF3Q8TEJ3 882 aaPredicted RBP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 RMDN3Q96TC7 470 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 PRKAG2Q9UGJ0 569 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 E2F6O75461 281 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 ADRA2BP18089 450 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 PSMC5P62195 406 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms