RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 DGKIO75912 1065 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 CACNB1Q02641 598 aaPredicted RBP22.21■■□□□ 1.15
SSBP4-210ENST00000601444 SHC4Q6S5L8 630 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 KIFAP3Q92845 792 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 ZNF689Q96CS4 500 aaPredicted RBP22.21■■□□□ 1.15
SSBP4-210ENST00000601444 GUCD1Q96NT3 240 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 NFKBIZQ9BYH8 718 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 CHST12Q9NRB3 414 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 AGPAT5Q9NUQ2 364 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 CCDC39Q9UFE4 941 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 PCDHA7Q9UN72 937 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 PCDHB7Q9Y5E2 793 aa22.21■■□□□ 1.15
SSBP4-210ENST00000601444 LINC01553A4QN01 128 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 B4GALT5O43286 388 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 TSPAN1O60635 241 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 CUTAO60888 179 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 NCLP19338 710 aaKnown RBP22.2■■□□□ 1.14
SSBP4-210ENST00000601444 GUCY2CP25092 1073 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 AMHR2Q16671 573 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 NAALADL2Q58DX5 795 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 CDCA2Q69YH5 1023 aaPredicted RBP22.2■■□□□ 1.14
SSBP4-210ENST00000601444 GPBP1Q86WP2 473 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 SP7Q8TDD2 431 aaPredicted RBP22.2■■□□□ 1.14
SSBP4-210ENST00000601444 KCNG4Q8TDN1 519 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 CPB2Q96IY4 423 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 RC3H2Q9HBD1 1191 aaKnown RBP22.2■■□□□ 1.14
SSBP4-210ENST00000601444 LRFN2Q9ULH4 789 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 USP20Q9Y2K6 914 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 ADGRA3Q8IWK6 1321 aa22.2■■□□□ 1.14
SSBP4-210ENST00000601444 CHD7Q9P2D1 2997 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 STAG3L1P0CL83 205 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 TXLNAP40222 546 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 NAMPTP43490 491 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 ME1P48163 572 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 PEX3P56589 373 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 RRAGBQ5VZM2 374 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 TWF2Q6IBS0 349 aaKnown RBP22.19■■□□□ 1.14
SSBP4-210ENST00000601444 FAM43BQ6ZT52 329 aaPredicted RBP22.19■■□□□ 1.14
SSBP4-210ENST00000601444 ECHDC2Q86YB7 292 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 PDILTQ8N807 584 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 LARP4BQ92615 738 aaKnown RBP22.19■■□□□ 1.14
SSBP4-210ENST00000601444 IFT74Q96LB3 600 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 COL4A6Q14031 1691 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 TTC3P53804 2025 aa22.19■■□□□ 1.14
SSBP4-210ENST00000601444 A0A0U1RQF3 1178 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 EPOPA6NHQ4 379 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 TTLL13PA6NNM8 815 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 ERLIN2O94905 339 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 EDN1P05305 212 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 FGFR1P11362 822 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 ATF7P17544 494 aaPredicted RBP22.18■■□□□ 1.14
SSBP4-210ENST00000601444 NPTX2P47972 431 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 LONRF3Q496Y0 759 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 PAN2Q504Q3 1202 aaKnown RBP22.18■■□□□ 1.14
SSBP4-210ENST00000601444 RNF169Q8NCN4 708 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 DEPTORQ8TB45 409 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 LEO1Q8WVC0 666 aaPredicted RBP22.18■■□□□ 1.14
SSBP4-210ENST00000601444 CDX2Q99626 313 aaPredicted RBP22.18■■□□□ 1.14
SSBP4-210ENST00000601444 PRDM12Q9H4Q4 367 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 TMEM161AQ9NX61 479 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 DACT1Q9NYF0 836 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 MTUS1Q9ULD2 1270 aa22.18■■□□□ 1.14
SSBP4-210ENST00000601444 CCDC169A6NNP5 214 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 RFXAPO00287 272 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 ARF4P18085 180 aaPredicted RBP22.17■■□□□ 1.14
SSBP4-210ENST00000601444 LIG1P18858 919 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 KRT85P78386 507 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 PPP2R5AQ15172 486 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 UBXN11Q5T124 520 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 ZNF598Q86UK7 904 aaKnown RBP22.17■■□□□ 1.14
SSBP4-210ENST00000601444 CDR2LQ86X02 465 aaPredicted RBP22.17■■□□□ 1.14
SSBP4-210ENST00000601444 ZBTB8OSQ8IWT0 167 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 ARNTL2Q8WYA1 636 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 DRC1Q96MC2 740 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 REEP2Q9BRK0 252 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 C17orf80Q9BSJ5 609 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 CCDC113Q9H0I3 377 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 FZD8Q9H461 694 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 ELAC1Q9H777 363 aaKnown RBP22.17■■□□□ 1.14
SSBP4-210ENST00000601444 RNF19AQ9NV58 838 aa22.17■■□□□ 1.14
SSBP4-210ENST00000601444 NUCB2P80303 420 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 GIT2Q14161 759 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 BTG3Q14201 252 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-210ENST00000601444 MYLIPQ8WY64 445 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 LPPQ93052 612 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 SPATA32Q96LK8 384 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 TIPINQ9BVW5 301 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 TRAIPQ9BWF2 469 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 EIF2AQ9BY44 585 aaKnown RBP22.16■■□□□ 1.14
SSBP4-210ENST00000601444 C2orf40Q9H1Z8 148 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 FAM105AQ9NUU6 356 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 KCND2Q9NZV8 630 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 STK17AQ9UEE5 414 aa22.16■■□□□ 1.14
SSBP4-210ENST00000601444 MEIS3P2A8K0S8 358 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 LINC00271P0C7V0 271 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 STAT6P42226 847 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 PCBP1Q15365 356 aaKnown RBP eCLIP22.15■■□□□ 1.14
SSBP4-210ENST00000601444 CCDC73Q6ZRK6 1079 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 FIBCD1Q8N539 461 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 GDPD2Q9HCC8 539 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms