RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PADI6Q6TGC4 694 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 B4GALNT4Q76KP1 1039 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 ZNF473Q8WTR7 871 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 UBE2TQ9NPD8 197 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 TMOD4Q9NZQ9 345 aa21.9■■□□□ 1.1
SHKBP1-225ENST00000600733 ERLIN2O94905 339 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 ITGB5P18084 799 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 PTENP60484 403 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 AADACL2Q6P093 401 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 NLRP14Q86W24 1093 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 SLC9A9Q8IVB4 645 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 ARHGEF19Q8IW93 802 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 CDAN1Q8IWY9 1227 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 MYCBPAPQ8TBZ2 947 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 ATP8B4Q8TF62 1192 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 CHURC1Q8WUH1 139 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 CCT8L2Q96SF2 557 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 AGPAT1Q99943 283 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 CARD9Q9H257 536 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 EHMT1Q9H9B1 1298 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 SETQ01105 290 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 PPP3CAQ08209 521 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 MTMR3Q13615 1198 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 LDHDQ86WU2 507 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 ZSWIM2Q8NEG5 633 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 GLG1Q92896 1179 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 PPANQ9NQ55 473 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 FAM114A2Q9NRY5 505 aa21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 CHORDC1Q9UHD1 332 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-225ENST00000600733 COL2A1P02458 1487 aaPredicted RBP21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 DCDC2CA8MYV0 355 aa21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 E7EVH7 732 aa21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 SH2D3AQ9BRG2 576 aa21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 CBWD1Q9BRT8 395 aa21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 GLIS2Q9BZE0 524 aaPredicted RBP21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHKBP1-225ENST00000600733 KRT13P13646 458 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 INPP5BP32019 993 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 GCLMP48507 274 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 DR1Q01658 176 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 GRIPAP1Q4V328 841 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 RUFY4Q6ZNE9 571 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 KAT2BQ92831 832 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 MXRA8Q9BRK3 442 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 TMOD2Q9NZR1 351 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 SLC12A6Q9UHW9 1150 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 ATP8A1Q9Y2Q0 1164 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 BCRP11274 1271 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 TMOD1P28289 359 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 STYK1Q6J9G0 422 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 ZNF746Q6NUN9 644 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 FMO2Q99518 471 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 VCPKMTQ9H867 229 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 ALG6Q9Y672 507 aa21.87■■□□□ 1.09
SHKBP1-225ENST00000600733 SPDYE2BA6NHP3 402 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 FTLP02792 175 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 SPDYE6P0CI01 402 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 BIRC3Q13489 604 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 ODF2Q5BJF6 829 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 MIGA2Q7L4E1 593 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 FMNL3Q8IVF7 1028 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 TEX2Q8IWB9 1127 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 ARFGAP2Q8N6H7 521 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 IL31RAQ8NI17 732 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 AGBL1Q96MI9 1066 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 KCNH7Q9NS40 1196 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 COL20A1Q9P218 1284 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 NOVA2Q9UNW9 492 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 DIS3Q9Y2L1 958 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 TULP1O00294 542 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 PPIP5K2O43314 1243 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 VCAM1P19320 739 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 MARCKSL1P49006 195 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 VAMP7P51809 220 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 TBC1D10BQ4KMP7 808 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 MIER3Q7Z3K6 550 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 KRT35Q92764 455 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 KAT5Q92993 513 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 RIT2Q99578 217 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 RAB17Q9H0T7 212 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 CTTNBP2NLQ9P2B4 639 aa21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 CNOT8Q9UFF9 292 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-225ENST00000600733 LOXHD1Q8IVV2 1947 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 GOLGA6L10A0A0M3HER8 536 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 TMEM110-MUSTN1A8MSY1 372 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 FAM107AO95990 144 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 RFX1P22670 979 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 USP8P40818 1118 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 KRT71Q3SY84 523 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 C1orf220Q5T0J3 134 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 INTS8Q75QN2 995 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 TRMT1LQ7Z2T5 733 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 ERP44Q9BS26 406 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 LARSQ9P2J5 1176 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 MEFVO15553 781 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 DUPD1Q68J44 220 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 RHOT2Q8IXI1 618 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 RPUSD2Q8IZ73 545 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 PLEKHO2Q8TD55 490 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 NAP1L3Q99457 506 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms