RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
CCDC9-203ENST00000596938 A0A087WWV3 80 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 CARNS1A5YM72 827 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 LAD1O00515 517 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 AXLP30530 894 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 NCBP1Q09161 790 aaKnown RBP11.7□□□□□ -0.54
CCDC9-203ENST00000596938 HYAL1Q12794 435 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 PTGDRQ13258 359 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 ADAM15Q13444 863 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 RNF169Q8NCN4 708 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 MCPH1Q8NEM0 835 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 PGBD4Q96DM1 585 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
CCDC9-203ENST00000596938 MRPL9Q9BYD2 267 aaKnown RBP11.7□□□□□ -0.54
CCDC9-203ENST00000596938 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
CCDC9-203ENST00000596938 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
CCDC9-203ENST00000596938 PCDHB6Q9Y5E3 794 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
CCDC9-203ENST00000596938 EVPLQ92817 2033 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 OFD1O75665 1012 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 GLRA2P23416 452 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 GJB2P29033 226 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 IRS1P35568 1242 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 PPM1AP35813 382 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 LTBRP36941 435 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 PRPHP41219 470 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 KRT17Q04695 432 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 NBR1Q14596 966 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 RILPL1Q5EBL4 403 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 UBXN11Q5T124 520 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 HAUS3Q68CZ6 603 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 GLB1LQ6UWU2 654 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 THNSL1Q8IYQ7 743 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 IGSF22Q8N9C0 903 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 HELQQ8TDG4 1101 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
CCDC9-203ENST00000596938 ZNF558Q96NG5 402 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 RAB34Q9BZG1 259 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 TLR9Q9NR96 1032 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 CLDND1Q9NY35 253 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 SPG21Q9NZD8 308 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 LRWD1Q9UFC0 647 aa11.69□□□□□ -0.54
CCDC9-203ENST00000596938 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
CCDC9-203ENST00000596938 FSCN2O14926 492 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 TSPAN1O60635 241 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 ERLIN2O94905 339 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 CYP11B2P19099 503 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
CCDC9-203ENST00000596938 ALDH7A1P49419 539 aaKnown RBP11.68□□□□□ -0.54
CCDC9-203ENST00000596938 ERVFC1P60507 584 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 CAPSQ13938 189 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 NOMO2Q5JPE7 1267 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 MCTP1Q6DN14 999 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
CCDC9-203ENST00000596938 EFHBQ8N7U6 833 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 ASAP3Q8TDY4 903 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 LPPQ93052 612 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 NECAB3Q96P71 396 aaPredicted RBP11.68□□□□□ -0.54
CCDC9-203ENST00000596938 NGRNQ9NPE2 291 aaKnown RBP11.68□□□□□ -0.54
CCDC9-203ENST00000596938 UBN1Q9NPG3 1134 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
CCDC9-203ENST00000596938 KANSL3Q9P2N6 904 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 FAM50BQ9Y247 325 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 BDP1A6H8Y1 2624 aa11.68□□□□□ -0.54
CCDC9-203ENST00000596938 CNTNAP2Q9UHC6 1331 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 FSD2A1L4K1 749 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 ARHGEF35A5YM69 484 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 H3BQ06 376 aaPredicted RBP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 H3BQV1 296 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 INO80B-WBP1J3KQ70 363 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 USO1O60763 962 aaKnown RBP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 CCT6AP40227 531 aaKnown RBP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 BCAR1P56945 870 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 MBTD1Q05BQ5 628 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 IL17AQ16552 155 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 ECM1Q16610 540 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 AMHR2Q16671 573 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 LARP1BQ659C4 914 aaKnown RBP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 NOTUMQ6P988 496 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 DTHD1Q6ZMT9 781 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 AGMOQ6ZNB7 445 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 EP400NLQ6ZTU2 488 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 ADGRD2Q7Z7M1 963 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 SLC39A11Q8N1S5 342 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 CDCA3Q99618 268 aaPredicted RBP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
CCDC9-203ENST00000596938 POLR3FQ9H1D9 316 aaPredicted RBP11.67□□□□□ -0.54
CCDC9-203ENST00000596938 IGFLR1Q9H665 355 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms