RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 BCL7CQ8WUZ0 217 aaPredicted RBP16.66■□□□□ 0.26
XRCC1-205ENST00000595789 HAS1Q92839 578 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 FAM20AQ96MK3 541 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 ADAM7Q9H2U9 754 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 NRDE2Q9H7Z3 1164 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 FAM105AQ9NUU6 356 aa16.66■□□□□ 0.26
XRCC1-205ENST00000595789 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
XRCC1-205ENST00000595789 SKIP12755 728 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 ITIH3Q06033 890 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 SCRN1Q12765 414 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 TPRNQ4KMQ1 711 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 CPLX2Q6PUV4 134 aaKnown RBP16.65■□□□□ 0.26
XRCC1-205ENST00000595789 CATSPER4Q7RTX7 472 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 MRPL10Q7Z7H8 261 aaKnown RBP16.65■□□□□ 0.26
XRCC1-205ENST00000595789 DDX53Q86TM3 631 aaKnown RBP16.65■□□□□ 0.26
XRCC1-205ENST00000595789 AUTS2Q8WXX7 1259 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 TMEM169Q96HH4 297 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 JPH2Q9BR39 696 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-205ENST00000595789 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 POMKQ9H5K3 350 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
XRCC1-205ENST00000595789 MINDY3Q9H8M7 445 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 GJB4Q9NTQ9 266 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
XRCC1-205ENST00000595789 DTNBO60941 627 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 ZC3H11AO75152 810 aaKnown RBP eCLIP16.64■□□□□ 0.25
XRCC1-205ENST00000595789 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
XRCC1-205ENST00000595789 CTSAP10619 480 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
XRCC1-205ENST00000595789 RAB27AP51159 221 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 POLGP54098 1239 aaPredicted RBP16.64■□□□□ 0.25
XRCC1-205ENST00000595789 GLB1LQ6UWU2 654 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 AGMOQ6ZNB7 445 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 OXER1Q8TDS5 423 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 SLC22A17Q8WUG5 538 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 PRPF31Q8WWY3 499 aaKnown RBP16.64■□□□□ 0.25
XRCC1-205ENST00000595789 NLRP4Q96MN2 994 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 PHOX2BQ99453 314 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 AGPAT5Q9NUQ2 364 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 DNAJB4Q9UDY4 337 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 PCDHB2Q9Y5E7 798 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 COL4A3BPQ9Y5P4 624 aa16.64■□□□□ 0.25
XRCC1-205ENST00000595789 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 C2CD4DB7Z1M9 353 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 TBX3O15119 743 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 GCFC2P16383 781 aaKnown RBP16.63■□□□□ 0.25
XRCC1-205ENST00000595789 SP100P23497 879 aaPredicted RBP16.63■□□□□ 0.25
XRCC1-205ENST00000595789 SLC11A1P49279 550 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 AFF1P51825 1210 aaKnown RBP16.63■□□□□ 0.25
XRCC1-205ENST00000595789 SPIRE1Q08AE8 756 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 TCF15Q12870 199 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 EPHA7Q15375 998 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 EARS2Q5JPH6 523 aaKnown RBP16.63■□□□□ 0.25
XRCC1-205ENST00000595789 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 NEK8Q86SG6 692 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 SUGP1Q8IWZ8 645 aaKnown RBP16.63■□□□□ 0.25
XRCC1-205ENST00000595789 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 C12orf76Q8N812 135 aaPredicted RBP16.63■□□□□ 0.25
XRCC1-205ENST00000595789 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 NECTIN4Q96NY8 510 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 PPME1Q9Y570 386 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 USP34Q70CQ2 3546 aa16.63■□□□□ 0.25
XRCC1-205ENST00000595789 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
XRCC1-205ENST00000595789 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 CARNS1A5YM72 827 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 ZBTB39O15060 712 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 PFKFB2O60825 505 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
XRCC1-205ENST00000595789 CTDNEP1O95476 244 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 WEE2P0C1S8 567 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 EPCAMP16422 314 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
XRCC1-205ENST00000595789 LAMTOR4Q0VGL1 99 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 CES5AQ6NT32 575 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 SLC7A3Q8WY07 619 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
XRCC1-205ENST00000595789 RGL1Q9NZL6 768 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 NR2E1Q9Y466 385 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
XRCC1-205ENST00000595789 CCNT1O60563 726 aaKnown RBP16.61■□□□□ 0.25
XRCC1-205ENST00000595789 LILRB3O75022 631 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 DDHD2O94830 711 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 PDGFBP01127 241 aaPredicted RBP16.61■□□□□ 0.25
XRCC1-205ENST00000595789 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 AVPR2P30518 371 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 RFC5P40937 340 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 MTHFRP42898 656 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 PTPN5P54829 565 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 GIT2Q14161 759 aa16.61■□□□□ 0.25
XRCC1-205ENST00000595789 BMS1Q14692 1282 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms