RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CTNNB1P35222 781 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 BMPR1AP36894 532 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 NAMPTP43490 491 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 ADGRE1Q14246 886 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 BECN1Q14457 450 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 TMEM119Q4V9L6 283 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 NOTUMQ6P988 496 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 RASSF8Q8NHQ8 419 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 PGBD4Q96DM1 585 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 PRIMPOLQ96LW4 560 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 DRC1Q96MC2 740 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 PNMA5Q96PV4 448 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 C11orf84Q9BUA3 381 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-229ENST00000593049 TMEM117Q9H0C3 514 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 AAASQ9NRG9 546 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 FAM105AQ9NUU6 356 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 PRMT7Q9NVM4 692 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-229ENST00000593049 KCNG1Q9UIX4 513 aa18.18■□□□□ 0.5
DNMT1-229ENST00000593049 COL4A4P53420 1690 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-229ENST00000593049 TRANK1O15050 2925 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 EPOPA6NHQ4 379 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 TBKBP1A7MCY6 615 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 H3BNC9 293 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 TXLNAP40222 546 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 EFNA5P52803 228 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 MBTD1Q05BQ5 628 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 GRB10Q13322 594 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 SLC39A14Q15043 492 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 PTPROQ16827 1216 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 PAN2Q504Q3 1202 aaKnown RBP18.17■□□□□ 0.5
DNMT1-229ENST00000593049 CDCA2Q69YH5 1023 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-229ENST00000593049 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 ZNF598Q86UK7 904 aaKnown RBP18.17■□□□□ 0.5
DNMT1-229ENST00000593049 SYT2Q8N9I0 419 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-229ENST00000593049 CNNM3Q8NE01 707 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 DEPTORQ8TB45 409 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 USP28Q96RU2 1077 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 CCSER1Q9C0I3 900 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 C17orf75Q9HAS0 396 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 PHLPP2Q6ZVD8 1323 aa18.17■□□□□ 0.5
DNMT1-229ENST00000593049 CARNS1A5YM72 827 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 RFXAPO00287 272 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 MARCKSP29966 332 aaPredicted RBP18.16■□□□□ 0.5
DNMT1-229ENST00000593049 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
DNMT1-229ENST00000593049 FAM187BQ17R55 369 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 CSPP1Q1MSJ5 1256 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 RINT1Q6NUQ1 792 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 C1orf186Q6ZWK4 172 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 KCNK18Q7Z418 384 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 SPRED2Q7Z698 418 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 KRI1Q8N9T8 703 aaKnown RBP18.16■□□□□ 0.5
DNMT1-229ENST00000593049 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 GDPD5Q8WTR4 605 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 P2RX5Q93086 422 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 MRPL9Q9BYD2 267 aaKnown RBP18.16■□□□□ 0.5
DNMT1-229ENST00000593049 CCDC39Q9UFE4 941 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 FBXO2Q9UK22 296 aaPredicted RBP18.16■□□□□ 0.5
DNMT1-229ENST00000593049 MTCH2Q9Y6C9 303 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 MRPL42Q9Y6G3 142 aaKnown RBP18.16■□□□□ 0.5
DNMT1-229ENST00000593049 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
DNMT1-229ENST00000593049 TSPAN1O60635 241 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 LPXNO60711 386 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 YEATS4O95619 227 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 F13A1P00488 732 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 SSBP05455 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
DNMT1-229ENST00000593049 LINC00271P0C7V0 271 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 PLA2G4BP0C869 781 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 FGFR1P11362 822 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 HOXA11P31270 313 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-229ENST00000593049 CEBPZQ03701 1054 aaKnown RBP18.15■□□□□ 0.5
DNMT1-229ENST00000593049 GPM6BQ13491 265 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 STK38Q15208 465 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 MAPK6Q16659 721 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 SPOUT1Q5T280 376 aaKnown RBP18.15■□□□□ 0.5
DNMT1-229ENST00000593049 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 LRRC43Q8N309 656 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 SPRYD3Q8NCJ5 442 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 CASD1Q96PB1 797 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 LMAN2LQ9H0V9 348 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 CSRNP2Q9H175 543 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 UBN1Q9NPG3 1134 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 PCDHB2Q9Y5E7 798 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
DNMT1-229ENST00000593049 HIP1RO75146 1068 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-229ENST00000593049 LAG3P18627 525 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 SLC12A3P55017 1021 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 GRIN1Q05586 938 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 DMP1Q13316 513 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-229ENST00000593049 AMHR2Q16671 573 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 GLB1LQ6UWU2 654 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 MRPL10Q7Z7H8 261 aaKnown RBP18.14■□□□□ 0.49
DNMT1-229ENST00000593049 PLIN2Q99541 437 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 RUSC1Q9BVN2 902 aa18.14■□□□□ 0.49
DNMT1-229ENST00000593049 FZD8Q9H461 694 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms