RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 SCLT1Q96NL6 688 aa18.83■□□□□ 0.6
RPRD1A-209ENST00000590898 ZHX3Q9H4I2 956 aa18.83■□□□□ 0.6
RPRD1A-209ENST00000590898 KMT5AQ9NQR1 393 aa18.83■□□□□ 0.6
RPRD1A-209ENST00000590898 GINS2Q9Y248 185 aa18.83■□□□□ 0.6
RPRD1A-209ENST00000590898 LRRIQ4A6NIV6 560 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 ITGB8P26012 769 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 CASP1P29466 404 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 MRE11P49959 708 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 EHHADHQ08426 723 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 TMEM199Q8N511 208 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 DEPTORQ8TB45 409 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 OSMRQ99650 979 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 FUCA2Q9BTY2 467 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 ST6GALNAC4Q9H4F1 302 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 ARHGAP28Q9P2N2 729 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 CCDC169A6NNP5 214 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 KLRC4O43908 158 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 SMC2O95347 1197 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 NCKAP1LP55160 1127 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 CCL23P55773 120 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 PSMD2Q13200 908 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 MBTPS1Q14703 1052 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 L1TD1Q5T7N2 865 aaKnown RBP18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 ZBTB8OSQ8IWT0 167 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 CCDC47Q96A33 483 aaKnown RBP18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 FIZ1Q96SL8 496 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 TMEM134Q9H6X4 195 aa18.82■□□□□ 0.6
RPRD1A-209ENST00000590898 TNRC18O15417 2968 aaPredicted RBP18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 CXCL10P02778 98 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 COASYQ13057 564 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 PNOCQ13519 176 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 KCNB1Q14721 858 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 GPNMBQ14956 572 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 TSHZ1Q6ZSZ6 1077 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 RNF214Q8ND24 703 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 PPP1R16BQ96T49 567 aa18.81■□□□□ 0.6
RPRD1A-209ENST00000590898 RPS6KA5O75582 802 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 LETM1O95202 739 aaPredicted RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 RPN1P04843 607 aaKnown RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 LPIN1Q14693 890 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 FAM187BQ17R55 369 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 NT5DC1Q5TFE4 455 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 ZNF720Q7Z2F6 126 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 SFR1Q86XK3 245 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 TMEM161BQ8NDZ6 487 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 TMEM40Q8WWA1 233 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 ZNF668Q96K58 619 aaPredicted RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 LTBP2Q14767 1821 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 K7ERI5 159 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 GPR182O15218 404 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 NBNO60934 754 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 RHOBTB3O94955 611 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 PFKMP08237 780 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 ALCAMQ13740 583 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 RBM43Q6ZSC3 357 aaKnown RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 HAUS6Q7Z4H7 955 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 ERCC4Q92889 916 aaPredicted RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 SCLYQ96I15 445 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 PRIMPOLQ96LW4 560 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 FZD8Q9H461 694 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 MRPL44Q9H9J2 332 aaKnown RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 NOC2LQ9Y3T9 749 aaKnown RBP18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 PCDHA5Q9Y5H7 936 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 ADGRA3Q8IWK6 1321 aa18.8■□□□□ 0.6
RPRD1A-209ENST00000590898 SLC16A4O15374 487 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 SFPQP23246 707 aaKnown RBP eCLIP18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 GTF2BQ00403 316 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 MBTD1Q05BQ5 628 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 MAPK6Q16659 721 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 PLEKHG4Q58EX7 1191 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 SMARCE1Q969G3 411 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 STRA6Q9BX79 667 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 GTPBP4Q9BZE4 634 aaKnown RBP18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 MINDY3Q9H8M7 445 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 EXOC1Q9NV70 894 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 PRMT7Q9NVM4 692 aaPredicted RBP18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 RMND1Q9NWS8 449 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 PCDHB13Q9Y5F0 798 aa18.79■□□□□ 0.6
RPRD1A-209ENST00000590898 INO80B-WBP1J3KQ70 363 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 CAPN15O75808 1086 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 GHRP10912 638 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 PPIGQ13427 754 aaKnown RBP eCLIP18.78■□□□□ 0.62e-7■■□□□ 12.7
RPRD1A-209ENST00000590898 FAM26FQ5R3K3 315 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 APBB2Q92870 758 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 BADQ92934 168 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 CCDC113Q9H0I3 377 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 AGO3Q9H9G7 860 aaKnown RBP18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 KIAA1468Q9P260 1216 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 ZMYND8Q9ULU4 1186 aaPredicted RBP18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 PADI3Q9ULW8 664 aa18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 NCBP1Q09161 790 aaKnown RBP18.78■□□□□ 0.6
RPRD1A-209ENST00000590898 STXBP4Q6ZWJ1 553 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms