RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MAFO75444 373 aaPredicted RBP15.35■□□□□ 0.05
HDAC5-208ENST00000588419 CXCL14O95715 111 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 SSBP05455 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
HDAC5-208ENST00000588419 SRGAP2CP0DJJ0 459 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 SKIP12755 728 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 XBP1P17861 261 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 QARSP47897 775 aaKnown RBP15.35■□□□□ 0.05
HDAC5-208ENST00000588419 FOSBP53539 338 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 CDC42EP1Q00587 391 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 SIGLEC14Q08ET2 396 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 KCNC3Q14003 757 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 PTPN21Q16825 1174 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 GALNT17Q6IS24 598 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 B3GNT9Q6UX72 402 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 TMEM184AQ6ZMB5 413 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 NEK8Q86SG6 692 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 C12orf76Q8N812 135 aaPredicted RBP15.35■□□□□ 0.05
HDAC5-208ENST00000588419 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 TMEM143Q96AN5 459 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 MBOAT7Q96N66 472 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 CEP89Q96ST8 783 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 JPH2Q9BR39 696 aaPredicted RBP15.35■□□□□ 0.05
HDAC5-208ENST00000588419 KCNH6Q9H252 994 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 POMKQ9H5K3 350 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 CYP26B1Q9NR63 512 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 TBC1D13Q9NVG8 400 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 COL4A3BPQ9Y5P4 624 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 HOXB8P17481 243 aaPredicted RBP15.34■□□□□ 0.05
HDAC5-208ENST00000588419 RAB27AP51159 221 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 CYP4A11Q02928 519 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 NOMO2Q5JPE7 1267 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 IER5LQ5T953 404 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 KANK3Q6NY19 840 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 MRPL43Q8N983 215 aaKnown RBP15.34■□□□□ 0.05
HDAC5-208ENST00000588419 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
HDAC5-208ENST00000588419 PRSS33Q8NF86 280 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 URGCPQ8TCY9 931 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 OXER1Q8TDS5 423 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 LXNQ9BS40 222 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 PHF20Q9BVI0 1012 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 ZBP1Q9H171 429 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 NRDE2Q9H7Z3 1164 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 VAV3Q9UKW4 847 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 NR2E1Q9Y466 385 aa15.34■□□□□ 0.05
HDAC5-208ENST00000588419 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 EPCAMP16422 314 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 SLC11A1P49279 550 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 PPP2R5CQ13362 524 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 FBXL6Q8N531 539 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 BCL7CQ8WUZ0 217 aaPredicted RBP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 PGBD4Q96DM1 585 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 DYDC2Q96IM9 177 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 FAM193BQ96PV7 902 aaPredicted RBP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 PHOX2BQ99453 314 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 AGPAT5Q9NUQ2 364 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 WRAP73Q9P2S5 460 aaPredicted RBP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.04
HDAC5-208ENST00000588419 PCDHB2Q9Y5E7 798 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 TRIOO75962 3097 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 WDFY4Q6ZS81 3184 aa15.33■□□□□ 0.04
HDAC5-208ENST00000588419 FAM205CA6NFA0 338 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 C2CD4DB7Z1M9 353 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 OFD1O75665 1012 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 P4HBP07237 508 aaKnown RBP15.32■□□□□ 0.04
HDAC5-208ENST00000588419 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
HDAC5-208ENST00000588419 VCPP55072 806 aaKnown RBP15.32■□□□□ 0.04
HDAC5-208ENST00000588419 EMC2Q15006 297 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 XKR9Q5GH70 373 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 BMP8AQ7Z5Y6 402 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 KREMEN2Q8NCW0 462 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 IGSF21Q96ID5 467 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 RIPOR3Q96MK2 946 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 FAM20AQ96MK3 541 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 RSAD1Q9HA92 442 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 KCNMB3Q9NPA1 279 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 RGL1Q9NZL6 768 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
HDAC5-208ENST00000588419 EPB41L2O43491 1005 aaKnown RBP15.31■□□□□ 0.04
HDAC5-208ENST00000588419 B4GALT3O60512 393 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 ERLIN2O94905 339 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 PDGFBP01127 241 aaPredicted RBP15.31■□□□□ 0.04
HDAC5-208ENST00000588419 POMCP01189 267 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 GALTP07902 379 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 CTSAP10619 480 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 YWHABP31946 246 aaKnown RBP15.31■□□□□ 0.04
HDAC5-208ENST00000588419 RFC5P40937 340 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 MTHFRP42898 656 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 PTPN5P54829 565 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 ITIH3Q06033 890 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 LAMTOR4Q0VGL1 99 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 CABP7Q86V35 215 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 ZNF280BQ86YH2 543 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 TDRD5Q8NAT2 981 aaKnown RBP15.31■□□□□ 0.04
HDAC5-208ENST00000588419 RNF149Q8NC42 400 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 PRPF31Q8WWY3 499 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms