RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 TMEM117Q9H0C3 514 aa11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 POLR3FQ9H1D9 316 aaPredicted RBP11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 BHMT2Q9H2M3 363 aa11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 GPRC5CQ9NQ84 441 aa11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 DDX19AQ9NUU7 478 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-220ENST00000581835 TCF20Q9UGU0 1960 aaKnown RBP11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 ARHGEF35A5YM69 484 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 VWA3AA6NCI4 1184 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 E9PMD0 336 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 ZNF623O75123 536 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 SKIP12755 728 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 MBTD1Q05BQ5 628 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 PCBP1Q15365 356 aaKnown RBP eCLIP11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 NAALADL2Q58DX5 795 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 CLLU1OSQ5K130 101 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 LRRC55Q6ZSA7 311 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 KLHL23Q8NBE8 558 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 RNF169Q8NCN4 708 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 CWH43Q9H720 699 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 THEGQ9P2T0 379 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
PPP4R1-220ENST00000581835 INO80B-WBP1J3KQ70 363 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 TSPAN1O60635 241 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 ERLIN2O94905 339 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 EYA4O95677 639 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 ITGB1P05556 798 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 AXLP30530 894 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 RAB27AP51159 221 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 RESTQ13127 1097 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 CAMK1Q14012 370 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 SF3A1Q15459 793 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 AMHR2Q16671 573 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 HYIQ5T013 277 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 UBXN11Q5T124 520 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 SPOUT1Q5T280 376 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 KCNK18Q7Z418 384 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 MRPL10Q7Z7H8 261 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 ABI1Q8IZP0 508 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 SPPL3Q8TCT6 385 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 HELQQ8TDG4 1101 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 LPPQ93052 612 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 ALG13Q9NP73 1137 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 MTMR6Q9Y217 621 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 PCDHB12Q9Y5F1 795 aa11.38□□□□□ -0.59
PPP4R1-220ENST00000581835 MUC3AQ02505 3323 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 LRRIQ4A6NIV6 560 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 MEIS3P2A8K0S8 358 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 BMP15O95972 392 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 DNAJB1P25685 340 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 NCBP1Q09161 790 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 LONRF3Q496Y0 759 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 TIGD5Q53EQ6 642 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 TCEAL5Q5H9L2 206 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 CDCA2Q69YH5 1023 aaPredicted RBP11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 FAM173BQ6P4H8 233 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 LRRC43Q8N309 656 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 KCTD17Q8N5Z5 321 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 COLGALT1Q8NBJ5 622 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 BSNDQ8WZ55 320 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 PGBD4Q96DM1 585 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 CPB2Q96IY4 423 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 AK8Q96MA6 479 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 PNMA5Q96PV4 448 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 NSUN3Q9H649 340 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 POLD4Q9HCU8 107 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 AAASQ9NRG9 546 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 COG5Q9UP83 839 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 PCDHB2Q9Y5E7 798 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 BDP1A6H8Y1 2624 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 TDRD15B5MCY1 1934 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 MYH15Q9Y2K3 1946 aa11.37□□□□□ -0.59
PPP4R1-220ENST00000581835 B4GALT5O43286 388 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 STX6O43752 255 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 OFD1O75665 1012 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 LAG3P18627 525 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 NAMPTP43490 491 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 MRPS5P82675 430 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 TFF2Q03403 129 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 GRIN1Q05586 938 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 PTPAQ15257 358 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 RINT1Q6NUQ1 792 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 NOTUMQ6P988 496 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 AGMOQ6ZNB7 445 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 RSPH1Q8WYR4 309 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 KIFAP3Q92845 792 aa11.36□□□□□ -0.59
PPP4R1-220ENST00000581835 HLA-CQ95604 372 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms