RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TET3O43151 1660 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 PHF2O75151 1096 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 PCYT1AP49585 367 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 ISCUQ9H1K1 167 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 L3MBTL1Q9Y468 752 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 FTLP02792 175 aaPredicted RBP11.42□□□□□ -0.58
SEC22B-201ENST00000578049 NFKBIAP25963 317 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 IZUMO3Q5VZ72 239 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 KCTD1Q719H9 257 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 MTBPQ96DY7 904 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 NEDD4P46934 1319 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 LTKP29376 864 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 SERPINB10P48595 397 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 RABL6Q3YEC7 729 aaPredicted RBP11.42□□□□□ -0.58
SEC22B-201ENST00000578049 CYB5R4Q7L1T6 521 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 TRPM8Q7Z2W7 1104 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 GSPT2Q8IYD1 628 aaKnown RBP11.42□□□□□ -0.58
SEC22B-201ENST00000578049 RPF1Q9H9Y2 349 aaKnown RBP11.42□□□□□ -0.58
SEC22B-201ENST00000578049 RTN2O75298 545 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 USP17L8P0C7I0 530 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 KRT4P19013 534 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 DPYDQ12882 1025 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 RNF103-CHMP3A0A140T963 221 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CFAP69A5D8W1 941 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 FDX1P10109 184 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 IFNA8P32881 189 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 PGM1P36871 562 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 ANLNQ9NQW6 1124 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CPSF3Q9UKF6 684 aaKnown RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 SERPINB9P50453 376 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 VAMP7P51809 220 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 RABGAP1LQ5R372 815 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 ITPRIPL1Q6GPH6 555 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 KDM7AQ6ZMT4 941 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 STK33Q9BYT3 514 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 KCND2Q9NZV8 630 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 NXF1Q9UBU9 619 aaKnown RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 WARS2Q9UGM6 360 aaKnown RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 PDHA1P08559 390 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 ACADSP16219 412 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 DAB2IPQ5VWQ8 1189 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 SETD3Q86TU7 594 aaPredicted RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CMTM5Q96DZ9 223 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 SEC16BQ96JE7 1060 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 ERGIC2Q96RQ1 377 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 COA1Q9GZY4 146 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CDC27P30260 824 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CRYMQ14894 314 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 TBCCQ15814 346 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 RBM43Q6ZSC3 357 aaKnown RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 GIMAP8Q8ND71 665 aaPredicted RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 DPF2Q92785 391 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 TRABDQ9H4I3 376 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 PDP2Q9P2J9 529 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 FAM47DPA6NHR8 397 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 NCK2O43639 380 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 PSMD7P51665 324 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 PDIA2Q13087 525 aaKnown RBP11.41□□□□□ -0.58
SEC22B-201ENST00000578049 NAB2Q15742 525 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CYFIP2Q96F07 1278 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 TRAF3IP3Q9Y228 551 aa11.41□□□□□ -0.58
SEC22B-201ENST00000578049 CASP2P42575 452 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 PADI6Q6TGC4 694 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 MTHFD1LQ6UB35 978 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 OR9Q1Q8NGQ5 310 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 ZNF512BQ96KM6 892 aaPredicted RBP11.4□□□□□ -0.58
SEC22B-201ENST00000578049 ATP6V0A4Q9HBG4 840 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 SLC24A3Q9HC58 644 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 EHD2Q9NZN4 543 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
SEC22B-201ENST00000578049 SCNN1DP51172 638 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 NOP14P78316 857 aaKnown RBP11.4□□□□□ -0.58
SEC22B-201ENST00000578049 RGS9BPQ6ZS82 235 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 LRRC43Q8N309 656 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.58
SEC22B-201ENST00000578049 MTO1Q9Y2Z2 717 aaKnown RBP11.4□□□□□ -0.58
SEC22B-201ENST00000578049 IQGAP3Q86VI3 1631 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 POTEMA6NI47 508 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 TBX3O15119 743 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 PTGISQ16647 500 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 HIF1AQ16665 826 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 OXER1Q8TDS5 423 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 WDR35Q9P2L0 1181 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 P4HBP07237 508 aaKnown RBP11.4□□□□□ -0.58
SEC22B-201ENST00000578049 MARK3P27448 753 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 NEK2P51955 445 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 EPHB1P54762 984 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 IL1RL1Q01638 556 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 MTF1Q14872 753 aa11.4□□□□□ -0.58
SEC22B-201ENST00000578049 UBE2SQ16763 222 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms