RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PRR23BQ6ZRT6 265 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 RALYLQ86SE5 291 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 CELF5Q8N6W0 485 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 BCL7CQ8WUZ0 217 aaPredicted RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 NLRP7Q8WX94 980 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 NELL1Q92832 810 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 FAM167AQ96KS9 214 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 FAM193BQ96PV7 902 aaPredicted RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 NELL2Q99435 816 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 IER2Q9BTL4 223 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 MYL10Q9BUA6 226 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 DDX23Q9BUQ8 820 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 PLEKHA4Q9H4M7 779 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 NRDE2Q9H7Z3 1164 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 AGO4Q9HCK5 861 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 CHST12Q9NRB3 414 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 DIAPH3Q9NSV4 1193 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 SEMA4GQ9NTN9 838 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 ZDHHC7Q9NXF8 308 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 PCDHA6Q9UN73 950 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 MRPS17Q9Y2R5 130 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 PCDHA8Q9Y5H6 950 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 BAHCC1Q9P281 2608 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 ASPMQ8IZT6 3477 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 LAMA4Q16363 1823 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 SOBPA7XYQ1 873 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 ZBTB42B2RXF5 422 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 DDX39AO00148 427 aaKnown RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 TEX28O15482 410 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 RFPL2O75678 378 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 DDAH1O94760 285 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 PDIA4P13667 645 aaKnown RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 DARSP14868 501 aaKnown RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 SDSP20132 328 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 SMARCA1P28370 1054 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 GLUD2P49448 558 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 GNAQP50148 359 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 GPC3P51654 580 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 GPC5P78333 572 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 ITGB3BPQ13352 177 aaPredicted RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 CSRP2Q16527 193 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 LPAL2Q16609 132 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 CEP55Q53EZ4 464 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 SLC44A4Q53GD3 710 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 SWSAP1Q6NVH7 229 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 EFCAB12Q6NXP0 572 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 TSSK4Q6SA08 328 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 CWC27Q6UX04 472 aaKnown RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 ABHD15Q6UXT9 468 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 ZNF852Q6ZMS4 543 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 TPRG1Q6ZUI0 275 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 CYB5R4Q7L1T6 521 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 TEX2Q8IWB9 1127 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 ZNF707Q96C28 371 aaPredicted RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 PGBD4Q96DM1 585 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 RPS6KC1Q96S38 1066 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 LZTS2Q9BRK4 669 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 TMEM175Q9BSA9 504 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 HERC2P3Q9BVR0 1158 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 TRAIPQ9BWF2 469 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 VN1R3Q9BXE9 311 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 ADAMTS10Q9H324 1103 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 DNAJB4Q9UDY4 337 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 PIN4Q9Y237 131 aaKnown RBP6.67□□□□□ -1.34
SMG6-219ENST00000575663 MYH6P13533 1939 aa6.67□□□□□ -1.34
SMG6-219ENST00000575663 DOCK5Q9H7D0 1870 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 LILRB3O75022 631 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 NR1I2O75469 434 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 C1RP00736 705 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 ALDH2P05091 517 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 HOXB3P14651 431 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 FGFR4P22455 802 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 FSHRP23945 695 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 ZNF76P36508 570 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 CCR3P51677 355 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 CDC42EP1Q00587 391 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 CREMQ03060 361 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 AASDHQ4L235 1098 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 N4BP2L1Q5TBK1 243 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 C20orf194Q5TEA3 1177 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 ANKRD45Q5TZF3 282 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 PARM1Q6UWI2 310 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 UNQ6494/PRO21346Q6UXR6 183 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 TRMT1LQ7Z2T5 733 aaKnown RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 SMAP1Q8IYB5 467 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 LRRC71Q8N4P6 559 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 C12orf50Q8NA57 414 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 FGF14Q92915 247 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 LPPQ93052 612 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 CLDN23Q96B33 292 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 PHF20Q9BVI0 1012 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 GCOM2Q9BZD3 368 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 PRKD2Q9BZL6 878 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 INO80BQ9C086 356 aaPredicted RBP6.66□□□□□ -1.34
SMG6-219ENST00000575663 NT5C3AQ9H0P0 336 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 LY9Q9HBG7 655 aa6.66□□□□□ -1.34
SMG6-219ENST00000575663 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms