RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TSKSQ9UJT2 592 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 REXO2Q9Y3B8 237 aaKnown RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 RIOK3O14730 519 aaKnown RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 POLGP54098 1239 aaPredicted RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 TTLL4Q14679 1199 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 PLPPR4Q7Z2D5 763 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 POLR3FQ9H1D9 316 aaPredicted RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 DENND3A2RUS2 1198 aa31.06■■■□□ 2.56
CTDNEP1-210ENST00000574322 PON1P27169 355 aa31.06■■■□□ 2.56
CTDNEP1-210ENST00000574322 KRT83P78385 493 aa31.06■■■□□ 2.56
CTDNEP1-210ENST00000574322 TCERG1LQ5VWI1 586 aa31.06■■■□□ 2.56
CTDNEP1-210ENST00000574322 INTS8Q75QN2 995 aaKnown RBP31.06■■■□□ 2.56
CTDNEP1-210ENST00000574322 XXYLT1Q8NBI6 393 aa31.06■■■□□ 2.56
CTDNEP1-210ENST00000574322 EMSYQ7Z589 1322 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 RBM47A0AV96 593 aaKnown RBP31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 ARL2P36404 184 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 SOX10P56693 466 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 BFSP1Q12934 665 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 AZI2Q9H6S1 392 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 VTA1Q9NP79 307 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 HSPBP1Q9NZL4 362 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 MYO6Q9UM54 1294 aa31.05■■■□□ 2.56
CTDNEP1-210ENST00000574322 POLR2FP61218 127 aaKnown RBP31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 HSDL1Q3SXM5 330 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 KLHDC7AQ5VTJ3 777 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 MAMDC4Q6UXC1 1216 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 DHX37Q8IY37 1157 aaKnown RBP31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 SLC7A3Q8WY07 619 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 BBXQ8WY36 941 aaPredicted RBP31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 CBWD1Q9BRT8 395 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 ARHGAP20Q9P2F6 1191 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 IVNS1ABPQ9Y6Y0 642 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 ADGRA3Q8IWK6 1321 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 UQCRHLA0A096LP55 91 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 GPR25O00155 361 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 UQCRHP07919 91 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 TXNP10599 105 aaKnown RBP31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 FMO5P49326 533 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 MAPK8IP2Q13387 824 aaPredicted RBP31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 DNAI1Q9UI46 699 aa31.04■■■□□ 2.56
CTDNEP1-210ENST00000574322 SSU72P8A0A1W2PR75 194 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 TISP43B9A030 160 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 LCA5LO95447 670 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 SLC9A1P19634 815 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 CNGA1P29973 690 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 ARHGAP25P42331 645 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 SLC26A2P50443 739 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 SP3Q02447 781 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 GRB14Q14449 540 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 BRDTQ58F21 947 aaPredicted RBP31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 KIFC3Q9BVG8 833 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 AIPL1Q9NZN9 384 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 DAAM1Q9Y4D1 1078 aa31.03■■■□□ 2.56
CTDNEP1-210ENST00000574322 NOP56O00567 594 aaKnown RBP31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 MAFO75444 373 aaPredicted RBP31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 ADSSP30520 456 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 TAPT1Q6NXT6 567 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 GPR142Q7Z601 462 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 CCDC42Q96M95 316 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 SPATA33Q96N06 139 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 L2HGDHQ9H9P8 463 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 SIX2Q9NPC8 291 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 NLRC4Q9NPP4 1024 aa31.02■■■□□ 2.56
CTDNEP1-210ENST00000574322 ECM2O94769 699 aaPredicted RBP31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 KRT13P13646 458 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 UCHL3P15374 230 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 MAPK4P31152 587 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 NAMPTP43490 491 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 GNG11P61952 73 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 SFMBT2Q5VUG0 894 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 HGSNATQ68CP4 663 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 EXOC8Q8IYI6 725 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 PDGFCQ9NRA1 345 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 MYO1AQ9UBC5 1043 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 ZNF236Q9UL36 1845 aa31.01■■■□□ 2.56
CTDNEP1-210ENST00000574322 FANCGO15287 622 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 ARHGAP29Q52LW3 1261 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 FBXL18Q96ME1 805 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 PCIF1Q9H4Z3 704 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 HAUS4Q9H6D7 363 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 LZTFL1Q9NQ48 299 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 GCNT4Q9P109 453 aa31.01■■■□□ 2.55
CTDNEP1-210ENST00000574322 A0A0U1RQJ8 604 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 ANKRD63C9JTQ0 380 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 PMM2O15305 246 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 GLRA2P23416 452 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 ENPEPQ07075 957 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 ASTE1Q2TB18 679 aaPredicted RBP31■■■□□ 2.55
CTDNEP1-210ENST00000574322 TAS1R3Q7RTX0 852 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 ATP8B4Q8TF62 1192 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 ATRIPQ8WXE1 791 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 KATNBL1Q9H079 304 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 SIP14410 1827 aa31■■■□□ 2.55
CTDNEP1-210ENST00000574322 P4HA2O15460 535 aa30.99■■■□□ 2.55
CTDNEP1-210ENST00000574322 GAS2O43903 313 aaKnown RBP30.99■■■□□ 2.55
CTDNEP1-210ENST00000574322 IPO7O95373 1038 aaKnown RBP30.99■■■□□ 2.55
CTDNEP1-210ENST00000574322 SERPING1P05155 500 aa30.99■■■□□ 2.55
CTDNEP1-210ENST00000574322 LACTBP83111 547 aaPredicted RBP30.99■■■□□ 2.55
CTDNEP1-210ENST00000574322 PLEKHH3Q7Z736 793 aa30.99■■■□□ 2.55
CTDNEP1-210ENST00000574322 TMEM143Q96AN5 459 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms