RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 IL6STP40189 918 aaPredicted RBP6.22□□□□□ -1.41
KARSP3-201ENST00000571212 MAGEA10P43363 369 aaPredicted RBP6.22□□□□□ -1.41
KARSP3-201ENST00000571212 SOGA3Q5TF21 947 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 STYK1Q6J9G0 422 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 PRR5LQ6MZQ0 368 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 ZNF790Q6PG37 636 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 LIMS2Q7Z4I7 341 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 ZCCHC14Q8WYQ9 949 aaKnown RBP6.22□□□□□ -1.41
KARSP3-201ENST00000571212 ZNF496Q96IT1 587 aaPredicted RBP6.22□□□□□ -1.41
KARSP3-201ENST00000571212 LCORQ96JN0 433 aaPredicted RBP6.22□□□□□ -1.41
KARSP3-201ENST00000571212 TAOK3Q9H2K8 898 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 PCNTO95613 3336 aa6.22□□□□□ -1.41
KARSP3-201ENST00000571212 B4GALT3O60512 393 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 PLATP00750 562 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 PABPC1P11940 636 aaKnown RBP6.21□□□□□ -1.42
KARSP3-201ENST00000571212 TEFQ10587 303 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 ZXDCQ2QGD7 858 aaPredicted RBP6.21□□□□□ -1.42
KARSP3-201ENST00000571212 LGI4Q8N135 537 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 SGSM3Q96HU1 749 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.42
KARSP3-201ENST00000571212 IQCA1LA6NCM1 817 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 NKRFO15226 690 aaKnown RBP eCLIP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 DDNO94850 711 aaPredicted RBP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 CAMTA2O94983 1202 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 SRGNP10124 158 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 ST5P78524 1137 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 RAB33AQ14088 237 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 PUM1Q14671 1186 aaKnown RBP eCLIP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 NSMFQ6X4W1 530 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 FAM124AQ86V42 546 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 PROSER1Q86XN7 944 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 CNBD1Q8NA66 436 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 IL17REQ8NFR9 667 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 MASTLQ96GX5 879 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 LOXL4Q96JB6 756 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 CFAP53Q96M91 514 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 YTHDC1Q96MU7 727 aaKnown RBP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 CLIC6Q96NY7 704 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 SSBP3Q9BWW4 388 aaPredicted RBP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 CNOT11Q9UKZ1 510 aaKnown RBP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 TELO2Q9Y4R8 837 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 ZNF536O15090 1300 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 CNTNAP1P78357 1384 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 KRIT1O00522 736 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 NPHP1O15259 732 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 A1BGP04217 495 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 FGFR1P11362 822 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 ADAM17P78536 824 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 TUSC3Q13454 348 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 BORAQ6PGQ7 559 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 RSPO2Q6UXX9 243 aaPredicted RBP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 LBX2Q6XYB7 198 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 OTOP3Q7RTS5 596 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 PHOSPHO1Q8TCT1 267 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 MBD6Q96DN6 1003 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 GPR20Q99678 358 aa6.2□□□□□ -1.42
KARSP3-201ENST00000571212 TAF1DQ9H5J8 278 aaPredicted RBP6.2□□□□□ -1.42
KARSP3-201ENST00000571212 PASKQ96RG2 1323 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 FOXN1O15353 648 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 GRK2P25098 689 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 GRK3P35626 688 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 CLEC4GQ6UXB4 293 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 SPATC1Q76KD6 591 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 PKNOX2Q96KN3 472 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 ST6GALNAC2Q9UJ37 374 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 NUDCQ9Y266 331 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 TRAF6Q9Y4K3 522 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 CEMIPQ8WUJ3 1361 aa6.19□□□□□ -1.42
KARSP3-201ENST00000571212 ADAMTSL1Q8N6G6 1762 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 TRAV20A0A0B4J274 112 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 KLRG2A4D1S0 409 aaPredicted RBP6.18□□□□□ -1.42
KARSP3-201ENST00000571212 U2SURPO15042 1029 aaKnown RBP6.18□□□□□ -1.42
KARSP3-201ENST00000571212 MAFKO60675 156 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 NPR1P16066 1061 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 CTCFP49711 727 aaPredicted RBP6.18□□□□□ -1.42
KARSP3-201ENST00000571212 TRMT10BQ6PF06 316 aaKnown RBP6.18□□□□□ -1.42
KARSP3-201ENST00000571212 NBPF5PQ86XG9 351 aaPredicted RBP6.18□□□□□ -1.42
KARSP3-201ENST00000571212 ST13P5Q8NFI4 369 aaPredicted RBP6.18□□□□□ -1.42
KARSP3-201ENST00000571212 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 PTPN18Q99952 460 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 TRIM55Q9BYV6 548 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 PPP4R1LQ9P1A2 415 aa6.18□□□□□ -1.42
KARSP3-201ENST00000571212 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 KCNQ3O43525 872 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 CKMP06732 381 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 SNRPA1P09661 255 aaKnown RBP6.17□□□□□ -1.42
KARSP3-201ENST00000571212 GNAT1P11488 350 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 COL6A1P12109 1028 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 IFRD2Q12894 506 aaPredicted RBP6.17□□□□□ -1.42
KARSP3-201ENST00000571212 CYP4F22Q6NT55 531 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 RTKN2Q8IZC4 609 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 IGDCC4Q8TDY8 1250 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 NUDT11Q96G61 164 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms