RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
SEMA4B-220ENST00000561321 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
SEMA4B-220ENST00000561321 FAM105AQ9NUU6 356 aa13.72□□□□□ -0.21
SEMA4B-220ENST00000561321 LINC01565O15544 149 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 NCK2O43639 380 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 ERLIN2O94905 339 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 SPATA31C1P0DKV0 1188 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 IL9P15248 144 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 NRIP1P48552 1158 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 TRAPPC10P48553 1259 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 ORC2Q13416 577 aaPredicted RBP13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 MXD4Q14582 209 aaPredicted RBP13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 CATSPER3Q86XQ3 398 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 ZNF558Q96NG5 402 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 TUFT1Q9NNX1 390 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 TLR9Q9NR96 1032 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
SEMA4B-220ENST00000561321 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 SKIP12755 728 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 GJB2P29033 226 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 LTBRP36941 435 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 NDUFV1P49821 464 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 RAB27AP51159 221 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 UBE3AQ05086 875 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 DLX2Q07687 328 aaPredicted RBP13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 CAPSQ13938 189 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 TFDP1Q14186 410 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 POLR3FQ9H1D9 316 aaPredicted RBP13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 PCDHB2Q9Y5E7 798 aa13.7□□□□□ -0.22
SEMA4B-220ENST00000561321 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 H3BQV1 296 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 INO80B-WBP1J3KQ70 363 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 PER2O15055 1255 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 ZC3H11AO75152 810 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 GLRA2P23416 452 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 RPA1P27694 616 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 HOXA11P31270 313 aaPredicted RBP13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 ARL2P36404 184 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 TOB1P50616 345 aaPredicted RBP13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 PTENP60484 403 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 ERVFC1P60507 584 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 PTGDRQ13258 359 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 C4orf32Q8N8J7 132 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 PGBD4Q96DM1 585 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 NACC1Q96RE7 527 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 TRAIPQ9BWF2 469 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 GBP3Q9H0R5 595 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 TLE6Q9H808 572 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 ENTPD7Q9NQZ7 604 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 SPG21Q9NZD8 308 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-220ENST00000561321 C5orf42Q9H799 3197 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 ARHGEF35A5YM69 484 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 LRRIQ4A6NIV6 560 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 TSPAN1O60635 241 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 ZNF623O75123 536 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 TBX10O75333 385 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 OFD1O75665 1012 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 CA8P35219 290 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 PPM1AP35813 382 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 CCT6AP40227 531 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 MCM2P49736 904 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 BCAR1P56945 870 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 PLCB3Q01970 1234 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 KRT17Q04695 432 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 MBTD1Q05BQ5 628 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 PUS10Q3MIT2 529 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 NOMO2Q5JPE7 1267 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 UBXN11Q5T124 520 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 HAUS3Q68CZ6 603 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 AGMOQ6ZNB7 445 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 TCF25Q9BQ70 676 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 TBC1D13Q9NVG8 400 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
SEMA4B-220ENST00000561321 FSCN2O14926 492 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 SSTR3P32745 418 aaPredicted RBP13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms