RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SYNPO2Q9UMS6 1093 aa5.72□□□□□ -1.49
CASC4-206ENST00000558847 PCDHGA12O60330 932 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 DTNBO60941 627 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 ECE1P42892 770 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 MLLT6P55198 1093 aaPredicted RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 SRSF2Q01130 221 aaKnown RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 MYBPC3Q14896 1274 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 CT83Q5H943 113 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PHF19Q5T6S3 580 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 MBNL2Q5VZF2 373 aaKnown RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 ZNF761Q86XN6 746 aaPredicted RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 DGKHQ86XP1 1220 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 ADAMTS17Q8TE56 1095 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 JADE3Q92613 823 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 EAF2Q96CJ1 260 aaPredicted RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 LOXL4Q96JB6 756 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 QRSL1Q9H0R6 528 aaKnown RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 OR10A5Q9H207 317 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 UCKL1Q9NWZ5 548 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 KCMF1Q9P0J7 381 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 SAP30BPQ9UHR5 308 aaKnown RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 DENND2AQ9ULE3 1009 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PCDHGA9Q9Y5G4 932 aaKnown RBP5.71□□□□□ -1.5
CASC4-206ENST00000558847 PCDHGA8Q9Y5G5 932 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PCDHGA7Q9Y5G6 932 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PCDHGA6Q9Y5G7 932 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PCDHGA3Q9Y5H0 932 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PCDHGA2Q9Y5H1 932 aa5.71□□□□□ -1.5
CASC4-206ENST00000558847 PRSS38A1L453 326 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 ELL2O00472 640 aaPredicted RBP5.7□□□□□ -1.5
CASC4-206ENST00000558847 OFD1O75665 1012 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 MPIG6BO95866 241 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 CHGBP05060 677 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 ITGB3P05106 788 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 PFKMP08237 780 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 XPAP23025 273 aaPredicted RBP5.7□□□□□ -1.5
CASC4-206ENST00000558847 MC4RP32245 332 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 NRG3P56975 720 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 PFKPQ01813 784 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 TCIRG1Q13488 830 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 MUM1Q2TAK8 710 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 PITRM1Q5JRX3 1037 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 RRP12Q5JTH9 1297 aaKnown RBP5.7□□□□□ -1.5
CASC4-206ENST00000558847 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 FAM180AQ6UWF9 173 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 KCNK18Q7Z418 384 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 CDYL2Q8N8U2 506 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 FBXO41Q8TF61 875 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 FATE1Q969F0 183 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 HIST1H2AHQ96KK5 128 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 YTHDC1Q96MU7 727 aaKnown RBP5.7□□□□□ -1.5
CASC4-206ENST00000558847 HIST1H2AJQ99878 128 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 KCTD10Q9H3F6 313 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 IFT122Q9HBG6 1241 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 SLC39A2Q9NP94 309 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 KCND1Q9NSA2 647 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 ZFP69BQ9UJL9 534 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 FBXO10Q9UK96 956 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 MYPNQ86TC9 1320 aa5.7□□□□□ -1.5
CASC4-206ENST00000558847 LCHNA4D1U4 455 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 NDUFS2O75306 463 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 IL18BPO95998 194 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 KNG1P01042 644 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 CLEC2LP0C7M8 214 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 ADAM17P78536 824 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 ODF1Q14990 250 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 FAM26FQ5R3K3 315 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 ZBTB41Q5SVQ8 909 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 IFIT1BQ5T764 474 aaKnown RBP5.69□□□□□ -1.5
CASC4-206ENST00000558847 BMP8AQ7Z5Y6 402 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 TPH2Q8IWU9 490 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 PITHD1Q9GZP4 211 aaPredicted RBP5.69□□□□□ -1.5
CASC4-206ENST00000558847 SEMA4AQ9H3S1 761 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 MTG2Q9H4K7 406 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 C1orf112Q9NSG2 853 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 ARHGAP20Q9P2F6 1191 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 FTSJ1Q9UET6 329 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 CROTQ9UKG9 612 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 EDARQ9UNE0 448 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 PCDHB6Q9Y5E3 794 aa5.69□□□□□ -1.5
CASC4-206ENST00000558847 ARID4BQ4LE39 1312 aaPredicted RBP5.69□□□□□ -1.5
CASC4-206ENST00000558847 VSTM5A8MXK1 200 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 DDX3XO00571 662 aaKnown RBP eCLIP5.68□□□□□ -1.5
CASC4-206ENST00000558847 CUTAO60888 179 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 OPHN1O60890 802 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 LPOP22079 712 aaPredicted RBP5.68□□□□□ -1.5
CASC4-206ENST00000558847 RGS3P49796 1198 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 LGALS4P56470 323 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 PURAQ00577 322 aaKnown RBP5.68□□□□□ -1.5
CASC4-206ENST00000558847 STILQ15468 1287 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 FAM124AQ86V42 546 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 GLB1L2Q8IW92 636 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 THEMISQ8N1K5 641 aaPredicted RBP5.68□□□□□ -1.5
CASC4-206ENST00000558847 CHST13Q8NET6 341 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 TTC17Q96AE7 1141 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 PSMD1Q99460 953 aa5.68□□□□□ -1.5
CASC4-206ENST00000558847 ACE2Q9BYF1 805 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms