RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 SOX7Q9BT81 388 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 PLA2G12BQ9BX93 195 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 WNT8AQ9H1J5 351 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 C12orf65Q9H3J6 166 aaKnown RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 PRDM12Q9H4Q4 367 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 METTL14Q9HCE5 456 aaKnown RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 JAG2Q9Y219 1238 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 THRAP3Q9Y2W1 955 aaKnown RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 NOC2LQ9Y3T9 749 aaKnown RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 SLC30A1Q9Y6M5 507 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 MYPNQ86TC9 1320 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 ST20-MTHFSA0A0A6YYL1 179 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 C2orf78A6NCI8 922 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 C1QTNF3-AMACRE9PGA6 284 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 SLC26A4O43511 780 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 PCDH8O95206 1070 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 CLEC2LP0C7M8 214 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 RPS19P39019 145 aaKnown RBP4.22□□□□□ -1.73
SCFD1-213ENST00000554776 SELENOPP49908 381 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 ADCY7P51828 1080 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 ADAM8P78325 824 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 TRIM25Q14258 630 aaKnown RBP4.22□□□□□ -1.73
SCFD1-213ENST00000554776 CDSNQ15517 529 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 PITRM1Q5JRX3 1037 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 CLEC14AQ86T13 490 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 CMIPQ8IY22 773 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 GPR135Q8IZ08 494 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 PPP1R14CQ8TAE6 165 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 LMBR1Q8WVP7 490 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 RABGGTAQ92696 567 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 ORAI2Q96SN7 254 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 CEP89Q96ST8 783 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 ANO3Q9BYT9 981 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 KLC2Q9H0B6 622 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 SLC6A15Q9H2J7 730 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 NELFAQ9H3P2 528 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 TYW1Q9NV66 732 aaKnown RBP4.22□□□□□ -1.73
SCFD1-213ENST00000554776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCFD1-213ENST00000554776 C14orf119Q9NWQ9 140 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 DNAI1Q9UI46 699 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 SYNPO2Q9UMS6 1093 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 PCDHB6Q9Y5E3 794 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 NUMBLQ9Y6R0 609 aa4.22□□□□□ -1.73
SCFD1-213ENST00000554776 ALG1L2C9J202 215 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 ALDH1L1O75891 902 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 SEC24DO94855 1032 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 ENPP1P22413 925 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 ATP2C1P98194 919 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 EXOSC10Q01780 885 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 FAPQ12884 760 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 R3HDM1Q15032 1099 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 FSCN1Q16658 493 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 CCDC62Q6P9F0 684 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 POLNQ7Z5Q5 900 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 FMNL3Q8IVF7 1028 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 CNTD1Q8N815 330 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 CDYL2Q8N8U2 506 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 SHCBP1Q8NEM2 672 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 GCDHQ92947 438 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 AHCYL2Q96HN2 611 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 HIST1H2AHQ96KK5 128 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 ACAP3Q96P50 834 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 OR14A2Q96R54 314 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 HIST1H2AJQ99878 128 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 FDXACB1Q9BRP7 624 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 NOL10Q9BSC4 688 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 OSBPL6Q9BZF3 934 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 PUS7LQ9H0K6 701 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 DEF6Q9H4E7 631 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 AGO3Q9H9G7 860 aaKnown RBP4.21□□□□□ -1.74
SCFD1-213ENST00000554776 CHPF2Q9P2E5 772 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 TSC22D4Q9Y3Q8 395 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 TCAF1Q9Y4C2 921 aa4.21□□□□□ -1.74
SCFD1-213ENST00000554776 HNRNPLP14866 589 aaKnown RBP eCLIP4.2□□□□□ -1.744e-7■■■□□ 15
SCFD1-213ENST00000554776 COMTP21964 271 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 GPR15P49685 360 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 BPIFB4P59827 614 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 TCIRG1Q13488 830 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 RIN1Q13671 783 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 SAFB2Q14151 953 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCFD1-213ENST00000554776 TTF1Q15361 905 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-213ENST00000554776 MAN2A1Q16706 1144 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCFD1-213ENST00000554776 INAVAQ3KP66 663 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 GAGE13Q4V321 117 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 HS1BP3Q53T59 392 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 CCDC178Q5BJE1 867 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 CT83Q5H943 113 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 ZNF585AQ6P3V2 769 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 Q6ZSN1 163 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 CBARPQ8N350 705 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-213ENST00000554776 PLA2G15Q8NCC3 412 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 EDAQ92838 391 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 EAF2Q96CJ1 260 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-213ENST00000554776 BORCS6Q96GS4 357 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 CDK5RAP1Q96SZ6 601 aaKnown RBP4.2□□□□□ -1.74
SCFD1-213ENST00000554776 GPR20Q99678 358 aa4.2□□□□□ -1.74
SCFD1-213ENST00000554776 MENTQ9BUN1 341 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms