RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 TWF2Q6IBS0 349 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 OTUD6AQ7L8S5 288 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 RBM23Q86U06 439 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 RHPN2Q8IUC4 686 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 HELQQ8TDG4 1101 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 OXER1Q8TDS5 423 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 TCP11Q8WWU5 503 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 PSPC1Q8WXF1 523 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 SUSD6Q92537 303 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 PGBD4Q96DM1 585 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 FAM122AQ96E09 287 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 ZNF668Q96K58 619 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 CEP170P1Q96L14 293 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 TCF25Q9BQ70 676 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 LXNQ9BS40 222 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 KCNH6Q9H252 994 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 ZSWIM4Q9H7M6 989 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 GJB4Q9NTQ9 266 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 AGPAT5Q9NUQ2 364 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 WRAP73Q9P2S5 460 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 STK39Q9UEW8 545 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 BARX2Q9UMQ3 279 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 USP15Q9Y4E8 981 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 PCDHGC5Q9Y5F6 944 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 IRAK3Q9Y616 596 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 CITO14578 2027 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 PLXNA3P51805 1871 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CNTNAP2Q9UHC6 1331 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 FAM86C2PA6NEL3 165 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 C2orf71A6NGG8 1288 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 PER2O15055 1255 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 MARCH6O60337 910 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CSDE1O75534 798 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CSPG5O95196 566 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 XRCC6P12956 609 aaKnown RBP eCLIP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 AXLP30530 894 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 NPEPPSP55786 919 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 BCAR1P56945 870 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 POU5F1BQ06416 359 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 NR5A1Q13285 461 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 GIT2Q14161 759 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 MXD4Q14582 209 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 SMC1AQ14683 1233 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 EMC2Q15006 297 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 EARS2Q5JPH6 523 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 PLPP4Q5VZY2 271 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 NCAPH2Q6IBW4 605 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 ANKRD54Q6NXT1 300 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 GLB1LQ6UWU2 654 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CATSPER4Q7RTX7 472 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 TMC7Q7Z402 723 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 MRPL10Q7Z7H8 261 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 FERMT3Q86UX7 667 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 IFNLR1Q8IU57 520 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 RNF135Q8IUD6 432 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 MRPL43Q8N983 215 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 RNF169Q8NCN4 708 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CNNM3Q8NE01 707 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 NSUN7Q8NE18 718 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 VN1R2Q8NFZ6 395 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 PRPF31Q8WWY3 499 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CASP10Q92851 521 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 CCDC51Q96ER9 411 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 TMEM169Q96HH4 297 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 NLRP4Q96MN2 994 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 HSD17B14Q9BPX1 270 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 SH2D3AQ9BRG2 576 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 PHF7Q9BWX1 381 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 S1PR5Q9H228 398 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 ENTPD7Q9NQZ7 604 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 ANKEF1Q9NU02 776 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 PCDHA12Q9UN75 941 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 PIN4Q9Y237 131 aaKnown RBP7.38□□□□□ -1.23
SLIRP-203ENST00000554074 DOCK8Q8NF50 2099 aa7.38□□□□□ -1.23
SLIRP-203ENST00000554074 ZMYM2Q9UBW7 1377 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 FAM205CA6NFA0 338 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 INPPL1O15357 1258 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NEMFO60524 1076 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 OFD1O75665 1012 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 DGAT1O75907 488 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 SLITRK3O94933 977 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 LARGE1O95461 756 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 CTSAP10619 480 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 PBX3P40426 434 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NEK4P51957 841 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 PTENP60484 403 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 ITIH3Q06033 890 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 LAMTOR4Q0VGL1 99 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 ORC2Q13416 577 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TRIM29Q14134 588 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TFDP1Q14186 410 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 CTTNQ14247 550 aaKnown RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 CALCRLQ16602 461 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 XKR9Q5GH70 373 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NOMO2Q5JPE7 1267 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 SYCE2Q6PIF2 218 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 BMP8AQ7Z5Y6 402 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms