RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ERC2O15083 957 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 HTRA2O43464 458 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-210ENST00000553455 AP1G1O43747 822 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 OFD1O75665 1012 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 CYP7B1O75881 506 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 KRT1P04264 644 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 IL13P35225 146 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 STAT5BP51692 787 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 SLC16A1P53985 500 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 MGAT5Q09328 741 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 GALEQ14376 348 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 GRM3Q14832 879 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 MAP9Q49MG5 647 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 VWA3BQ502W6 1294 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 MUM1L1Q5H9M0 696 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 PRR18Q8N4B5 295 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 NUDT10Q8NFP7 164 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 TIFAQ96CG3 184 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 NUDT11Q96G61 164 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 GREM2Q9H772 168 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 SYNPO2Q9UMS6 1093 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 IRAK3Q9Y616 596 aa6.72□□□□□ -1.33
SYNE2-210ENST00000553455 A0A1W2PR48 441 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 CCDC154A6NI56 674 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 CAND2O75155 1236 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 LY86O95711 162 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 HNRNPLP14866 589 aaKnown RBP eCLIP6.71□□□□□ -1.34
SYNE2-210ENST00000553455 PDCP20941 246 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-210ENST00000553455 RPL13P26373 211 aaKnown RBP6.71□□□□□ -1.34
SYNE2-210ENST00000553455 POLD1P28340 1107 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 ETV4P43268 484 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 NRG3P56975 720 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 CD69Q07108 199 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 HLTFQ14527 1009 aaKnown RBP eCLIP6.71□□□□□ -1.34
SYNE2-210ENST00000553455 C3orf36Q3SXR2 165 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 USP45Q70EL2 814 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 SAPCD2Q86UD0 394 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 OR2I1PQ8NGU4 316 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 DIS3LQ8TF46 1054 aaKnown RBP6.71□□□□□ -1.34
SYNE2-210ENST00000553455 WDR92Q96MX6 357 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 OSBPL6Q9BZF3 934 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 ARNT2Q9HBZ2 717 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 PRDM11Q9NQV5 511 aa6.71□□□□□ -1.34
SYNE2-210ENST00000553455 PI3P19957 117 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 KCNQ1P51787 676 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 MGAT2Q10469 447 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 TRIM68Q6AZZ1 485 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 CYB5RLQ6IPT4 315 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 LMBR1LQ6UX01 489 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.34
SYNE2-210ENST00000553455 PIK3C3Q8NEB9 887 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 HOXB13Q92826 284 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-210ENST00000553455 MVB12AQ96EY5 273 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 YTHDC1Q96MU7 727 aaKnown RBP6.7□□□□□ -1.34
SYNE2-210ENST00000553455 DNM3Q9UQ16 869 aa6.7□□□□□ -1.34
SYNE2-210ENST00000553455 DDX3XO00571 662 aaKnown RBP eCLIP6.69□□□□□ -1.34
SYNE2-210ENST00000553455 HMGCRP04035 888 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 GAAP10253 952 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 ARHGAP29Q52LW3 1261 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 CNKSR3Q6P9H4 555 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 SLC4A10Q6U841 1118 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 SYDE1Q6ZW31 735 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-210ENST00000553455 GRAMD1CQ8IYS0 662 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 ZNF526Q8TF50 670 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-210ENST00000553455 DPF2Q92785 391 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 PWWP2AQ96N64 755 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 MAP3K14Q99558 947 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 ACO2Q99798 780 aaKnown RBP6.69□□□□□ -1.34
SYNE2-210ENST00000553455 ADI1Q9BV57 179 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 RBM12Q9NTZ6 932 aaKnown RBP6.69□□□□□ -1.34
SYNE2-210ENST00000553455 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 INTUQ9ULD6 942 aa6.69□□□□□ -1.34
SYNE2-210ENST00000553455 SH3D21A4FU49 640 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 A6NNZ2 444 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 KRT18P05783 430 aaKnown RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 GSPT1P15170 499 aaKnown RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 CTSSP25774 331 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 CAP1Q01518 475 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 MEF2AQ02078 507 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 SEPT2Q15019 361 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 MCTP1Q6DN14 999 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 KLHDC10Q6PID8 442 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 ABHD15Q6UXT9 468 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 UNC5BQ8IZJ1 945 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 MARCH10Q8NA82 808 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 ZBTB34Q8NCN2 500 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 RIN2Q8WYP3 895 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 PAWRQ96IZ0 340 aaKnown RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 PCGF6Q9BYE7 350 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 C1orf112Q9NSG2 853 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 SAP30BPQ9UHR5 308 aaKnown RBP6.68□□□□□ -1.34
SYNE2-210ENST00000553455 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
SYNE2-210ENST00000553455 CTNND1O60716 968 aaKnown RBP6.67□□□□□ -1.34
SYNE2-210ENST00000553455 FSBPO95073 299 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 MYL1P05976 194 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 MYBP10242 640 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms