RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 A0A1W2PQY0 241 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 TMEM82A0PJX8 343 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 H7BY64 318 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 H7C1D1 291 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 M0R2C6 588 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 ZEB2O60315 1214 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 COBLO75128 1261 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 IGHA1P01876 353 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 PROCP04070 461 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 SOD2P04179 222 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 GRK2P25098 689 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 GRK3P35626 688 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 BCL6P41182 706 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 KIR2DL1P43626 348 aaPredicted RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 KIR2DL2P43627 348 aaPredicted RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 CDKN1CP49918 316 aaPredicted RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 DNM2P50570 870 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 RIPK4P57078 832 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 FKBP1AP62942 108 aaKnown RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 FOXO4P98177 505 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 EXOSC10Q01780 885 aaKnown RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 ZP2Q05996 745 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 BNIP3Q12983 259 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CRY1Q16526 586 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 PLEKHG6Q3KR16 790 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CCDC184Q52MB2 194 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 STRIP1Q5VSL9 837 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CEP68Q76N32 757 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 STRA8Q7Z7C7 330 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 SPPL2CQ8IUH8 684 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 VGLL2Q8N8G2 317 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 C2orf69Q8N8R5 385 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 IGSF22Q8N9C0 903 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CCDC191Q8NCU4 936 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 TMEM52Q8NDY8 209 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 PCDH19Q8TAB3 1148 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 PI4K2BQ8TCG2 481 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 BRI3BPQ8WY22 251 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 TRMT2BQ96GJ1 504 aaKnown RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 CCDC120Q96HB5 630 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 TMEM169Q96HH4 297 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 PRMT6Q96LA8 375 aaPredicted RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 SPOCK3Q9BQ16 436 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 POLR3GLQ9BT43 218 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 FAM126AQ9BYI3 521 aaPredicted RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 CELF4Q9BZC1 486 aaKnown RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 GREM2Q9H772 168 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 IFT22Q9H7X7 185 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 IPPKQ9H8X2 491 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CARS2Q9HA77 564 aaKnown RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 CATSPERZQ9NTU4 200 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CLDND1Q9NY35 253 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 ADGRE2Q9UHX3 823 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF112Q9UJU3 913 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 COA3Q9Y2R0 106 aaPredicted RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 LAMB1P07942 1786 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 LAMB2P55268 1798 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF804BA4D1E1 1349 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 FAM205AQ6ZU69 1335 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 A0A1W2PQJ5 194 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CCDC66A2RUB6 948 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 FADS2P1A8MWK0 482 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CBX4O00257 560 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 MARCH6O60337 910 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 EYA4O95677 639 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 S100BP04271 92 aaPredicted RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CKMP06732 381 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CD8BP10966 210 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 PYGMP11217 842 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 EIF2S2P20042 333 aaKnown RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 POU3F3P20264 500 aaPredicted RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 MMP14P50281 582 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 GUCY2FP51841 1108 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 RTP1P59025 263 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 IL2P60568 153 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 OCRLQ01968 901 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 AIMP1Q12904 312 aaKnown RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CRHR2Q13324 411 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 SLC14A2Q15849 920 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 SEPT7Q16181 437 aaKnown RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 ARHGAP44Q17R89 818 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 HSP90AB3PQ58FF7 597 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 PRSS36Q5K4E3 855 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 GALNT18Q6P9A2 607 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 C17orf99Q6UX52 265 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 KIF6Q6ZMV9 814 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 EP400NLQ6ZTU2 488 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 CEP128Q6ZU80 1094 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 FAM43AQ8N2R8 423 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 NXPE1Q8N323 547 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 OXR1Q8N573 874 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 ANKS4BQ8N8V4 417 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 TDRD7Q8NHU6 1098 aaKnown RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 USP33Q8TEY7 942 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 BCL7CQ8WUZ0 217 aaPredicted RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 STAG1Q8WVM7 1258 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 RTF1Q92541 710 aaKnown RBP2.99□□□□□ -1.93
CPSF6-207ENST00000551516 MAP6Q96JE9 813 aa2.99□□□□□ -1.93
CPSF6-207ENST00000551516 ALPK1Q96QP1 1244 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms