RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 ALS2CLQ60I27 953 aa10.53□□□□□ -0.72
DDX11-229ENST00000545668 ALKBH5Q6P6C2 394 aaKnown RBP10.53□□□□□ -0.72
DDX11-229ENST00000545668 TEPSINQ96N21 525 aa10.53□□□□□ -0.72
DDX11-229ENST00000545668 MXRA8Q9BRK3 442 aa10.53□□□□□ -0.72
DDX11-229ENST00000545668 ASTN2O75129 1339 aaPredicted RBP10.53□□□□□ -0.72
DDX11-229ENST00000545668 HNRNPH3P31942 346 aaKnown RBP10.52□□□□□ -0.72
DDX11-229ENST00000545668 SLCO1A2P46721 670 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 MMGT1Q8N4V1 131 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 LXNQ9BS40 222 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 KIAA1683Q9H0B3 1180 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 PARVGQ9HBI0 331 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 KCNH7Q9NS40 1196 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 CEP72Q9P209 647 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 TRAF3IP3Q9Y228 551 aa10.52□□□□□ -0.72
DDX11-229ENST00000545668 KIF1CO43896 1103 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 LRRN2O75325 713 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 IFNAR2P48551 515 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 CYP2J2P51589 502 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 ZNF280AP59817 542 aaPredicted RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 KCNA1Q09470 495 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 SPP2Q13103 211 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 IFI16Q16666 785 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 KLHDC7AQ5VTJ3 777 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 PPP1R12CQ9BZL4 782 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 EDEM3Q9BZQ6 932 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 TYW1Q9NV66 732 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 TPX2Q9ULW0 747 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 ZNF536O15090 1300 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 ARHGEF35A5YM69 484 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 DAPK3O43293 454 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 UPP2O95045 317 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 NR3C1P04150 777 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 ITGB5P18084 799 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 NMT1P30419 496 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 AARSP49588 968 aaKnown RBP eCLIP10.52□□□□□ -0.739e-8■■■■□ 21.8
DDX11-229ENST00000545668 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 ZNF211Q13398 564 aaPredicted RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 EPHA7Q15375 998 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 TTMPQ5BVD1 217 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 NBPF12Q5TAG4 269 aaPredicted RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 GJB7Q6PEY0 223 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 ARFGAP2Q8N6H7 521 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 MGARPQ8TDB4 240 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 AENQ8WTP8 325 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 BAP1Q92560 729 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 NUCKS1Q9H1E3 243 aaKnown RBP10.52□□□□□ -0.73
DDX11-229ENST00000545668 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 PSME4Q14997 1843 aa10.52□□□□□ -0.73
DDX11-229ENST00000545668 ZBED4O75132 1171 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 VIMP08670 466 aaKnown RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 EPB41P11171 864 aaKnown RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 MYCLP12524 364 aaPredicted RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 EIF2AK2P19525 551 aaKnown RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 LSP1P33241 339 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 RANBP1P43487 201 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 HSD17B4P51659 736 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 MARSP56192 900 aaKnown RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 NSMFQ6X4W1 530 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 FAM178BQ8IXR5 827 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 CTNNBL1Q8WYA6 563 aaPredicted RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 RIT2Q99578 217 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 CELF4Q9BZC1 486 aaKnown RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 COL20A1Q9P218 1284 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 CHORDC1Q9UHD1 332 aaPredicted RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 VCAM1P19320 739 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 ZC2HC1CQ53FD0 456 aaPredicted RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 ODR4Q5SWX8 454 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 C1orf186Q6ZWK4 172 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 EPM2AIP1Q7L775 607 aaPredicted RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 FRMD5Q7Z6J6 570 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 CASKIN2Q8WXE0 1202 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 RPAP3Q9H6T3 665 aaPredicted RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 OLFML3Q9NRN5 406 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 UTP11Q9Y3A2 253 aaKnown RBP10.51□□□□□ -0.73
DDX11-229ENST00000545668 HOXD13P35453 343 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 PTK2Q05397 1052 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 ADCY1Q08828 1119 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 SNX1Q13596 522 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 STXBP4Q6ZWJ1 553 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 IL31RAQ8NI17 732 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 LRRC45Q96CN5 670 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 SLC38A10Q9HBR0 1119 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 PICK1Q9NRD5 415 aa10.51□□□□□ -0.73
DDX11-229ENST00000545668 SART1O43290 800 aaKnown RBP10.5□□□□□ -0.73
DDX11-229ENST00000545668 AKAP3O75969 853 aa10.5□□□□□ -0.73
DDX11-229ENST00000545668 AFPP02771 609 aaKnown RBP10.5□□□□□ -0.73
DDX11-229ENST00000545668 PLTPP55058 493 aa10.5□□□□□ -0.73
DDX11-229ENST00000545668 RPS6P62753 249 aaKnown RBP10.5□□□□□ -0.73
DDX11-229ENST00000545668 MTMR1Q13613 665 aa10.5□□□□□ -0.73
DDX11-229ENST00000545668 PPP1R7Q15435 360 aa10.5□□□□□ -0.73
DDX11-229ENST00000545668 DCAF15Q66K64 600 aa10.5□□□□□ -0.73
DDX11-229ENST00000545668 HS2ST1Q7LGA3 356 aa10.5□□□□□ -0.73
DDX11-229ENST00000545668 CCDC26Q8TAB7 109 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms