RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 GYS2P54840 703 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 DLG4P78352 724 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 NNTQ13423 1086 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 EPC2Q52LR7 807 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 XKR9Q5GH70 373 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 NLRX1Q86UT6 975 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 EXOC7Q9UPT5 735 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 RIPK3Q9Y572 518 aa19.46■□□□□ 0.71
GNE-204ENST00000539208 RLFQ13129 1914 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 TESPA1A2RU30 521 aaPredicted RBP19.45■□□□□ 0.7
GNE-204ENST00000539208 KCNK3O14649 394 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 CLSTN1O94985 981 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 ZBTB7AO95365 584 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 NR3C2P08235 984 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 DSG3P32926 999 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 TNNC1P63316 161 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 C1orf220Q5T0J3 134 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 WNK4Q96J92 1243 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 PICK1Q9NRD5 415 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 PCDHA10Q9Y5I2 948 aa19.45■□□□□ 0.7
GNE-204ENST00000539208 TISP43B9A030 160 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 C19orf81C9J6K1 198 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 ATP2A1O14983 1001 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 SMTNP53814 917 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 PEX3P56589 373 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 PPP3CAQ08209 521 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 CALR3Q96L12 384 aaKnown RBP19.44■□□□□ 0.7
GNE-204ENST00000539208 CCDC66A2RUB6 948 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 FOXN3O00409 490 aaPredicted RBP19.44■□□□□ 0.7
GNE-204ENST00000539208 SLC16A4O15374 487 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 DKC1O60832 514 aaKnown RBP eCLIP19.44■□□□□ 0.7
GNE-204ENST00000539208 DNA2P51530 1060 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 ANO5Q75V66 913 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 SND1Q7KZF4 910 aaKnown RBP eCLIP19.44■□□□□ 0.7
GNE-204ENST00000539208 OTUD6AQ7L8S5 288 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 PEX26Q7Z412 305 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 DNAAF5Q86Y56 855 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 SCFD2Q8WU76 684 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 RFFLQ8WZ73 363 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 GDAP1L1Q96MZ0 367 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 NTPCRQ9BSD7 190 aaKnown RBP19.44■□□□□ 0.7
GNE-204ENST00000539208 C17orf75Q9HAS0 396 aa19.44■□□□□ 0.7
GNE-204ENST00000539208 TMEM150BA6NC51 233 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 AGPSO00116 658 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 GLI1P08151 1106 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 TNFAIP3P21580 790 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 FAM102BQ5T8I3 360 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 SNRNP48Q6IEG0 339 aaKnown RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 NT5DC3Q86UY8 548 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 APOBEC3FQ8IUX4 373 aaKnown RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 RASGEF1CQ8N431 466 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 TMEM161BQ8NDZ6 487 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 NSUN6Q8TEA1 469 aaKnown RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 SPIRE2Q8WWL2 714 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 HES6Q96HZ4 224 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 GPRC5CQ9NQ84 441 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 TBX20Q9UMR3 447 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 GJA3Q9Y6H8 435 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 PHIPQ8WWQ0 1821 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 RNF40O75150 1001 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 ARHGAP44Q17R89 818 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 MAP4K3Q8IVH8 894 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 EIF1ADQ8N9N8 165 aaKnown RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 KIFAP3Q92845 792 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 ZKSCAN4Q969J2 545 aaPredicted RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 WRNIP1Q96S55 665 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 KRT12Q99456 494 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 SH2D3AQ9BRG2 576 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 MTFR1LQ9H019 292 aa19.43■□□□□ 0.7
GNE-204ENST00000539208 UBE2TQ9NPD8 197 aaPredicted RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 ZNF214Q9UL59 606 aaPredicted RBP19.43■□□□□ 0.7
GNE-204ENST00000539208 NFASCO94856 1347 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 GOLGA6BA6NDN3 693 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 STAM2O75886 525 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 HEXIM1O94992 359 aaKnown RBP19.42■□□□□ 0.7
GNE-204ENST00000539208 GGCXP38435 758 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 MRPS25P82663 173 aaKnown RBP19.42■□□□□ 0.7
GNE-204ENST00000539208 PPATQ06203 517 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 ALS2CLQ60I27 953 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 PLA2G4FQ68DD2 849 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 DAAM2Q86T65 1068 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 METTL13Q8N6R0 699 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 SLC35G2Q8TBE7 412 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 PLEKHO2Q8TD55 490 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 CTNNBL1Q8WYA6 563 aaPredicted RBP19.42■□□□□ 0.7
GNE-204ENST00000539208 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.42■□□□□ 0.73e-10■■■■■ 88.3
GNE-204ENST00000539208 AGPAT1Q99943 283 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 HINFPQ9BQA5 517 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 ANKRD62A6NC57 917 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 PGRMC1O00264 195 aaKnown RBP19.42■□□□□ 0.7
GNE-204ENST00000539208 KCNA2P16389 499 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 NPTX2P47972 431 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 GCLMP48507 274 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 PAK2Q13177 524 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 DMP1Q13316 513 aaPredicted RBP19.42■□□□□ 0.7
GNE-204ENST00000539208 TCEAL1Q15170 157 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 ATP6V0A1Q93050 837 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 CDHR1Q96JP9 859 aa19.42■□□□□ 0.7
GNE-204ENST00000539208 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms