RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 TCP11Q8WWU5 503 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 PRPF31Q8WWY3 499 aaKnown RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 TMEM143Q96AN5 459 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 MTMR9Q96QG7 549 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 EIF2AK1Q9BQI3 630 aaKnown RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 LLPHQ9BRT6 129 aaKnown RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 AGPAT5Q9NUQ2 364 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 SPG21Q9NZD8 308 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
SYVN1-214ENST00000532771 PUF60Q9UHX1 559 aaKnown RBP10.65□□□□□ -0.7
SYVN1-214ENST00000532771 PER2O15055 1255 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 ASAP2O43150 1006 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 SRGAP2CP0DJJ0 459 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 PBX3P40426 434 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 TXKP42681 527 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 KRT17Q04695 432 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 COASYQ13057 564 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 SAFBQ15424 915 aaKnown RBP eCLIP10.64□□□□□ -0.71
SYVN1-214ENST00000532771 DUSP6Q16828 381 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 C8orf34Q49A92 452 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 TMEM31Q5JXX7 168 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 GLB1LQ6UWU2 654 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 SLC39A11Q8N1S5 342 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 RNF149Q8NC42 400 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 SMRP1Q8NCR6 262 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 LPPQ93052 612 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 C8orf76Q96K31 380 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
SYVN1-214ENST00000532771 KIF2CQ99661 725 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 MTRQ99707 1265 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 TCF25Q9BQ70 676 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 TMEM60Q9H2L4 133 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 MINDY3Q9H8M7 445 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 XPNPEP1Q9NQW7 623 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 ANKEF1Q9NU02 776 aa10.64□□□□□ -0.71
SYVN1-214ENST00000532771 BARX2Q9UMQ3 279 aaPredicted RBP10.64□□□□□ -0.71
SYVN1-214ENST00000532771 CARNS1A5YM72 827 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 GPR37L1O60883 481 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 DGAT1O75907 488 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 HOXA11P31270 313 aaPredicted RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 MCM7P33993 719 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 BCAR1P56945 870 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 HMGN5P82970 282 aaKnown RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 GUCY1B3Q02153 619 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 MXD4Q14582 209 aaPredicted RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 PCBP1Q15365 356 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 NOMO2Q5JPE7 1267 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 PLPP4Q5VZY2 271 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 TMEM184AQ6ZMB5 413 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 VN1R2Q8NFZ6 395 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 ZSCAN31Q96LW9 406 aaPredicted RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 LRFN3Q9BTN0 628 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 NGRNQ9NPE2 291 aaKnown RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 SH2B1Q9NRF2 756 aaPredicted RBP10.63□□□□□ -0.71
SYVN1-214ENST00000532771 TBC1D13Q9NVG8 400 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 PCDHB2Q9Y5E7 798 aa10.63□□□□□ -0.71
SYVN1-214ENST00000532771 POTEMA6NI47 508 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 HIDE1A8MVS5 230 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 OFD1O75665 1012 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.71
SYVN1-214ENST00000532771 ALADP13716 330 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 ATP2B1P20020 1258 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 RARRES1P49788 294 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 PTENP60484 403 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 RBM10P98175 930 aaKnown RBP10.62□□□□□ -0.71
SYVN1-214ENST00000532771 POU5F1BQ06416 359 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 ORC2Q13416 577 aaPredicted RBP10.62□□□□□ -0.71
SYVN1-214ENST00000532771 KCNC3Q14003 757 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 TFDP1Q14186 410 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 LONRF3Q496Y0 759 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 UBXN11Q5T124 520 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 AGMOQ6ZNB7 445 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 TMC7Q7Z402 723 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 MRPL10Q7Z7H8 261 aaKnown RBP10.62□□□□□ -0.71
SYVN1-214ENST00000532771 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
SYVN1-214ENST00000532771 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 PGBD4Q96DM1 585 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 TMEM169Q96HH4 297 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 NRDE2Q9H7Z3 1164 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 ARID2Q68CP9 1835 aa10.62□□□□□ -0.71
SYVN1-214ENST00000532771 C2orf71A6NGG8 1288 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 NT5C1B-RDH14C9J2C7 533 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 DCXO43602 365 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 ZC3H11AO75152 810 aaKnown RBP eCLIP10.61□□□□□ -0.71
SYVN1-214ENST00000532771 ERLIN2O94905 339 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 OR52Z1P0C646 297 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 SPATA31C1P0DKV0 1188 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 SRGAP2BP0DMP2 458 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 AXLP30530 894 aa10.61□□□□□ -0.71
SYVN1-214ENST00000532771 ARL2P36404 184 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms