RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 LRCH2Q5VUJ6 765 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 GPR149Q86SP6 731 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 BRF1Q92994 677 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 TEKT3Q9BXF9 490 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 FAM105AQ9NUU6 356 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 VPS54Q9P1Q0 977 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 PIN4Q9Y237 131 aaKnown RBP23.7■■□□□ 1.38
CHKA-206ENST00000531341 DNAH14Q0VDD8 3507 aa23.7■■□□□ 1.38
CHKA-206ENST00000531341 PSMD10O75832 226 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 DDHD2O94830 711 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 SSBP05455 408 aaKnown RBP eCLIP23.69■■□□□ 1.38
CHKA-206ENST00000531341 SFNP31947 248 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 JAK3P52333 1124 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 NTRK3Q16288 839 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 RHPN2Q8IUC4 686 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 KLHL5Q96PQ7 755 aa23.69■■□□□ 1.38
CHKA-206ENST00000531341 SUCLA2Q9P2R7 463 aaPredicted RBP23.69■■□□□ 1.38
CHKA-206ENST00000531341 CCDC196A0A1B0GTZ2 297 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 LILRB3O75022 631 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 CLCN4P51793 760 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 FGD1P98174 961 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 GIT2Q14161 759 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 GLB1LQ6UWU2 654 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 B3GNT9Q6UX72 402 aa23.68■■□□□ 1.38
CHKA-206ENST00000531341 NKD2Q969F2 451 aaPredicted RBP23.68■■□□□ 1.38
CHKA-206ENST00000531341 RIF1Q5UIP0 2472 aaKnown RBP23.67■■□□□ 1.38
CHKA-206ENST00000531341 ZNF623O75123 536 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 CNPP09543 421 aaKnown RBP23.67■■□□□ 1.38
CHKA-206ENST00000531341 SFPQP23246 707 aaKnown RBP eCLIP23.67■■□□□ 1.38
CHKA-206ENST00000531341 USP11P51784 963 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 RNASELQ05823 741 aaKnown RBP23.67■■□□□ 1.38
CHKA-206ENST00000531341 KRT32Q14532 448 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 XKR3Q5GH77 459 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 AGMOQ6ZNB7 445 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 MIER3Q7Z3K6 550 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 ADSSL1Q8N142 457 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 SFXN1Q9H9B4 322 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 KCNK12Q9HB15 430 aa23.67■■□□□ 1.38
CHKA-206ENST00000531341 DENND4AQ7Z401 1863 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 NARSO43776 548 aaKnown RBP23.66■■□□□ 1.38
CHKA-206ENST00000531341 N4BP1O75113 896 aaKnown RBP23.66■■□□□ 1.38
CHKA-206ENST00000531341 MAFO75444 373 aaPredicted RBP23.66■■□□□ 1.38
CHKA-206ENST00000531341 TDP2O95551 362 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 AOC1P19801 751 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 KLRC2P26717 231 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 TDGQ13569 410 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 CATSPER4Q7RTX7 472 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 BICD2Q8TD16 824 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 TBCKQ8TEA7 893 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 ACSF2Q96CM8 615 aaPredicted RBP23.66■■□□□ 1.38
CHKA-206ENST00000531341 NLRP4Q96MN2 994 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 SLC26A6Q9BXS9 759 aa23.66■■□□□ 1.38
CHKA-206ENST00000531341 NID2Q14112 1375 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 DDX11L8A8MPP1 907 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 HMGB1P09429 215 aaKnown RBP23.65■■□□□ 1.38
CHKA-206ENST00000531341 SKIP12755 728 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 DNM2P50570 870 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 CDC42EP1Q00587 391 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 Q4G0T1 1027 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 BMP2KLQ5H9B9 411 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 PLA2G4FQ68DD2 849 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 CCDC149Q6ZUS6 474 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 ANO5Q75V66 913 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 TAS1R1Q7RTX1 841 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 ZNF410Q86VK4 478 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 PPFIBP1Q86W92 1011 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 ZNF579Q8NAF0 562 aaKnown RBP23.65■■□□□ 1.38
CHKA-206ENST00000531341 RSAD2Q8WXG1 361 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 IFT122Q9HBG6 1241 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 DUSP12Q9UNI6 340 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 PCDHB2Q9Y5E7 798 aa23.65■■□□□ 1.38
CHKA-206ENST00000531341 MYBP10242 640 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 FOXK2Q01167 660 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 LETM2Q2VYF4 491 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 OTOP3Q7RTS5 596 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 CCDC105Q8IYK2 499 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 SIX5Q8N196 739 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 RSPH1Q8WYR4 309 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 JAKMIP1Q96N16 626 aaKnown RBP23.64■■□□□ 1.37
CHKA-206ENST00000531341 EMILIN2Q9BXX0 1053 aa23.64■■□□□ 1.37
CHKA-206ENST00000531341 INO80BQ9C086 356 aaPredicted RBP23.64■■□□□ 1.37
CHKA-206ENST00000531341 NCOA5Q9HCD5 579 aaKnown RBP23.64■■□□□ 1.37
CHKA-206ENST00000531341 SPDYE4A6NLX3 237 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 NRP1O14786 923 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 POMCP01189 267 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 CCT2P78371 535 aaKnown RBP23.63■■□□□ 1.37
CHKA-206ENST00000531341 AKAP17AQ02040 695 aaKnown RBP23.63■■□□□ 1.37
CHKA-206ENST00000531341 ANGPT1Q15389 498 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 UBXN11Q5T124 520 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 MRPL10Q7Z7H8 261 aaKnown RBP23.63■■□□□ 1.37
CHKA-206ENST00000531341 RDM1Q8NG50 284 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 KCNB2Q92953 911 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 RNF26Q9BY78 433 aaPredicted RBP23.63■■□□□ 1.37
CHKA-206ENST00000531341 MINDY3Q9H8M7 445 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 AGPAT5Q9NUQ2 364 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 ZNF292O60281 2723 aa23.63■■□□□ 1.37
CHKA-206ENST00000531341 C2CD2LO14523 706 aa23.62■■□□□ 1.37
CHKA-206ENST00000531341 HOXA11P31270 313 aaPredicted RBP23.62■■□□□ 1.37
CHKA-206ENST00000531341 RAB27AP51159 221 aa23.62■■□□□ 1.37
CHKA-206ENST00000531341 NPEPPSP55786 919 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms