RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CCDC146Q8IYE0 955 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 RTF1Q92541 710 aaKnown RBP6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 GNRHR2Q96P88 292 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 CHMP4AQ9BY43 222 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 PCGF6Q9BYE7 350 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 MEGF9Q9H1U4 602 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 OR10A5Q9H207 317 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 SLC12A5Q9H2X9 1139 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 CUTAO60888 179 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 MAFO75444 373 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 SCAND1P57086 179 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 GALEQ14376 348 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 MYBPC3Q14896 1274 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 CIR1Q86X95 450 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 NME9Q86XW9 330 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 CHST13Q8NET6 341 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 WDR48Q8TAF3 677 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 RUNDC1Q96C34 613 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 TEKT5Q96M29 485 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 WNT8AQ9H1J5 351 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 ARNT2Q9HBZ2 717 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 ANLNQ9NQW6 1124 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 IP6K2Q9UHH9 426 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 MSRAQ9UJ68 235 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 ANKRD6Q9Y2G4 727 aa6.2□□□□□ -1.42
HMGB1P1-201ENST00000522557 HMGCRP04035 888 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 INSRRP14616 1297 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 ETV4P43268 484 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 ADCY1Q08828 1119 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 GBX1Q14549 363 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 EIF4HQ15056 248 aaKnown RBP6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 TBR1Q16650 682 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 MAP9Q49MG5 647 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 OTOP2Q7RTS6 562 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 WDR75Q8IWA0 830 aaKnown RBP6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 TPH2Q8IWU9 490 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 IFNL2Q8IZJ0 200 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 JADE3Q92613 823 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 LRRC37BQ96QE4 947 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 LMF1Q96S06 567 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 GPR20Q99678 358 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 FOXB1Q99853 325 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 KIAA1683Q9H0B3 1180 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 PRDM12Q9H4Q4 367 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 SEC61A2Q9H9S3 476 aa6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 NOC2LQ9Y3T9 749 aaKnown RBP6.19□□□□□ -1.42
HMGB1P1-201ENST00000522557 A0A0G2JNJ9 132 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 PF4V1P10720 104 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 ZNF20P17024 532 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 PCOLCEQ15113 449 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 PITRM1Q5JRX3 1037 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 DGKHQ86XP1 1220 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 DNERQ8NFT8 737 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 NEIL1Q96FI4 390 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 WWC2-AS2Q96NR7 200 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 HAPLN2Q9GZV7 340 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 CD248Q9HCU0 757 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 Q9UFV3 132 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 TUBD1Q9UJT1 453 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 FBXO10Q9UK96 956 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 ZBTB21Q9ULJ3 1066 aa6.18□□□□□ -1.42
HMGB1P1-201ENST00000522557 GOLGA8AA7E2F4 631 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 GOLGA8BA8MQT2 603 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 FOXS1O43638 330 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 PFKMP08237 780 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 ATF3P18847 181 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 C5AR1P21730 350 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 STAT5BP51692 787 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 ALDH6A1Q02252 535 aaKnown RBP6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 GTF2H3Q13889 308 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 TMEM200BQ69YZ2 307 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 TRIM68Q6AZZ1 485 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 GRAMD4Q6IC98 578 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 TAX1BP1Q86VP1 789 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 PHYKPLQ8IUZ5 450 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 CALML6Q8TD86 181 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 PITHD1Q9GZP4 211 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 ZNF700Q9H0M5 742 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 OBP2AQ9NY56 170 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 MAGEL2Q9UJ55 1249 aa6.17□□□□□ -1.42
HMGB1P1-201ENST00000522557 PATE3B3GLJ2 98 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 U2AF1L5P0DN76 240 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 APEX1P27695 318 aaKnown RBP6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 CYP2C19P33261 490 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 RGS3P49796 1198 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 ADKP55263 362 aaKnown RBP6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 U2AF1Q01081 240 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 SRSF2Q01130 221 aaKnown RBP6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 TCIRG1Q13488 830 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 UBE4AQ14139 1066 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 GFOD2Q3B7J2 385 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 ZMAT1Q5H9K5 638 aa6.16□□□□□ -1.42
HMGB1P1-201ENST00000522557 RRP12Q5JTH9 1297 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms