RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 AIFM3Q96NN9 605 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 RAB3IPQ96QF0 476 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 VPS35Q96QK1 796 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 DHRS9Q9BPW9 319 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 API5Q9BZZ5 524 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 RNF38Q9H0F5 515 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 ARMC7Q9H6L4 198 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TMBIM4Q9HC24 238 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TCP11L1Q9NUJ3 509 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 STOML1Q9UBI4 398 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 VPS51Q9UID3 782 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 FGD5Q6ZNL6 1462 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 EHBP1L1Q8N3D4 1523 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 MYH1P12882 1939 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 CPSF1Q10570 1443 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 POTEMA6NI47 508 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 INO80B-WBP1J3KQ70 363 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 HOXA2O43364 376 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 IDH3BO43837 385 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TLR2O60603 784 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 ARHGEF15O94989 841 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 FKBP9O95302 570 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 OLFM2O95897 454 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 SHBGP04278 402 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 POLR2CP19387 275 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 SLC1A1P43005 524 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 NLRP6P59044 892 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 PTK2Q05397 1052 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 CDK18Q07002 472 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 CKAP4Q07065 602 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 CD300CQ08708 224 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 MKRN3Q13064 507 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 RASGRF1Q13972 1273 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TAF1CQ15572 869 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 NFE2L2Q16236 605 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TXNRD1Q16881 649 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 KLHL38Q2WGJ6 581 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 AKAP4Q5JQC9 854 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TTC39AQ5SRH9 613 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 METTL11BQ5VVY1 283 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 FYB2Q5VWT5 728 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TSHZ3Q63HK5 1081 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 SPECC1LQ69YQ0 1117 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 PDXDC1Q6P996 788 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 SLC30A10Q6XR72 485 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 LRRTM3Q86VH5 581 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 ST13P4Q8IZP2 240 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 CPSF7Q8N684 471 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 ENGASEQ8NFI3 743 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 IPCEF1Q8WWN9 437 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 UTP4Q969X6 686 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 LTV1Q96GA3 475 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 PBKQ96KB5 322 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 ELAC2Q9BQ52 826 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 SDF4Q9BRK5 362 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 LRRC1Q9BTT6 524 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TRPV6Q9H1D0 765 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 ASCC2Q9H1I8 757 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 SMARCAD1Q9H4L7 1026 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 RNF41Q9H4P4 317 aaPredicted RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 DCLRE1BQ9H816 532 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 WASH6PQ9NQA3 447 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 TRNAU1APQ9NX07 287 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 SAMD15Q9P1V8 674 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 CNOT8Q9UFF9 292 aaKnown RBP4.97□□□□□ -1.61
PCM1-215ENST00000522275 PFDN2Q9UHV9 154 aa4.97□□□□□ -1.61
PCM1-215ENST00000522275 MROH7Q68CQ1 1323 aa4.96□□□□□ -1.61
PCM1-215ENST00000522275 BIVM-ERCC5R4GMW8 1640 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 KDM6AO15550 1401 aaPredicted RBP4.96□□□□□ -1.62
PCM1-215ENST00000522275 A6NL46 340 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 E9PMD0 336 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 VILLO15195 856 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 FOXP2O15409 715 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 KLHL41O60662 606 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 DKC1O60832 514 aaKnown RBP eCLIP4.96□□□□□ -1.62
PCM1-215ENST00000522275 GMNNO75496 209 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 OR5F1O95221 314 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 M6PRP20645 277 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 CASP14P31944 242 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 FXR1P51114 621 aaKnown RBP eCLIP4.96□□□□□ -1.621e-6■■■□□ 17.2
PCM1-215ENST00000522275 BLVRAP53004 296 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 PTPN5P54829 565 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 MAP3K7CLP57077 242 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 KDSRQ06136 332 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 C2orf54Q08AI8 447 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 PDE1CQ14123 709 aaPredicted RBP4.96□□□□□ -1.62
PCM1-215ENST00000522275 SIM2Q14190 667 aaPredicted RBP4.96□□□□□ -1.62
PCM1-215ENST00000522275 DSC3Q14574 896 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 GRIK5Q16478 980 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 GATAD2AQ86YP4 633 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 CARNMT1Q8N4J0 409 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 FLAD1Q8NFF5 587 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 LRRC8CQ8TDW0 803 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 SH3RF3Q8TEJ3 882 aaPredicted RBP4.96□□□□□ -1.62
PCM1-215ENST00000522275 NLRP7Q8WX94 980 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 RUBCNQ92622 972 aa4.96□□□□□ -1.62
PCM1-215ENST00000522275 INTS12Q96CB8 462 aaKnown RBP4.96□□□□□ -1.62
PCM1-215ENST00000522275 METTL2AQ96IZ6 378 aaKnown RBP4.96□□□□□ -1.62
PCM1-215ENST00000522275 ZNF317Q96PQ6 595 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms