RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IFI16Q16666 785 aaKnown RBP5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 INF2Q27J81 1249 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 LRIT3Q3SXY7 679 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 FIGNQ5HY92 759 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 MROH9Q5TGP6 573 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 RNF43Q68DV7 783 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 DLK2Q6UY11 383 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZNF765Q7L2R6 523 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 RASAL3Q86YV0 1011 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 Q8N1Y9 231 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 OSBPL1AQ9BXW6 950 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 C7orf69Q9H7B7 122 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZSWIM5Q9P217 1185 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 NOB1Q9ULX3 412 aaKnown RBP5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 CGNL1Q0VF96 1302 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 NRXN2Q9P2S2 1712 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 ANKRD31Q8N7Z5 1873 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 EPG5Q9HCE0 2579 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 POLR2AP24928 1970 aaKnown RBP5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 ARFGEF2Q9Y6D5 1785 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 ANKRD26Q9UPS8 1709 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 CD163L1Q9NR16 1453 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 ARNTLO00327 626 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 MT-CO1P00395 513 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 PF4V1P10720 104 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 AKAP5P24588 427 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 GRIK1P39086 918 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 BCL6P41182 706 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 ADCY1Q08828 1119 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 DUSP4Q13115 394 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 PICALMQ13492 652 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 KSR2Q6VAB6 950 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 CEP68Q76N32 757 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 CPNE8Q86YQ8 564 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 RIOX2Q8IUF8 465 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 KIAA1958Q8N8K9 716 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 UBE2FQ969M7 185 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 HSPBAP1Q96EW2 488 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 ERO1AQ96HE7 468 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 UHRF1Q96T88 793 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 DBNDD2Q9BQY9 259 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 LRFN3Q9BTN0 628 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 OBP2AQ9NY56 170 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 GPRC5DQ9NZD1 345 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 CBLCQ9ULV8 474 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 INVSQ9Y283 1065 aa5.86□□□□□ -1.47
HMGB1P23-201ENST00000518743 A0A1W2PQ45 241 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 A0A1W2PQY0 241 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 HMX2A2RU54 273 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 H3BS24 57 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 CLASP2O75122 1294 aaKnown RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 KRT37O76014 449 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 LTFP02788 710 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 TRIM27P14373 513 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 FOSL2P15408 326 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 RPL10P27635 214 aaKnown RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 CRKLP46109 303 aaKnown RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 EGR3Q06889 387 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 GBX1Q14549 363 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 KCTD2Q14681 263 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 NKPD1Q17RQ9 610 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 CC2D1AQ6P1N0 951 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 ARHGAP36Q6ZRI8 547 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 OTOP3Q7RTS5 596 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 SPACA3Q8IXA5 215 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 RTKN2Q8IZC4 609 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 TDHQ8IZJ6 230 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 CD99L2Q8TCZ2 262 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 NETO1Q8TDF5 533 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 ASB11Q8WXH4 323 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 HSPA12BQ96MM6 686 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 MPHOSPH6Q99547 160 aaKnown RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 CDX2Q99626 313 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 KCNJ15Q99712 375 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 SSBP4Q9BWG4 385 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 CSRNP2Q9H175 543 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 WNT8AQ9H1J5 351 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 R3HDMLQ9H3Y0 253 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 TOMM22Q9NS69 142 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 ERVK13-1Q9NX77 482 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 X6R8D5 127 aa5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 ANKRD11Q6UB99 2663 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P23-201ENST00000518743 A0A1W2PQ27 194 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 A0A1W2PQ64 194 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 A0A1W2PQC6 194 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 A0A1W2PQD8 194 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 FAM170BA6NMN3 283 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 VSTM5A8MXK1 200 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 CYP27B1O15528 508 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 XPOTO43592 962 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms