RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 UBE3AQ05086 875 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 RNF169Q8NCN4 708 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 PPP2R3CQ969Q6 453 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 AK8Q96MA6 479 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 NT5C3AQ9H0P0 336 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 KIAA1024Q9UPX6 916 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 COL6A3P12111 3177 aa23.66■■□□□ 1.38
UBE2D3-229ENST00000510129 NCK2O43639 380 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 GLRA2P23416 452 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 CAPSQ13938 189 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 TJAP1Q5JTD0 557 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 NOTUMQ6P988 496 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 ZBTB8OSQ8IWT0 167 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 HLA-CQ95604 372 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 CASD1Q96PB1 797 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 C2orf40Q9H1Z8 148 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 BHMT2Q9H2M3 363 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 NSUN3Q9H649 340 aaKnown RBP23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 DDX19AQ9NUU7 478 aaKnown RBP23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 PLAGL2Q9UPG8 496 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 CHD7Q9P2D1 2997 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 CDH23Q9H251 3354 aa23.65■■□□□ 1.38
UBE2D3-229ENST00000510129 INO80B-WBP1J3KQ70 363 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 PPM1AP35813 382 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 GATMP50440 423 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 GLB1LQ6UWU2 654 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 ASAP3Q8TDY4 903 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 KIFAP3Q92845 792 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 PRIMPOLQ96LW4 560 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 MINDY3Q9H8M7 445 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 UBN1Q9NPG3 1134 aa23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 TYW1Q9NV66 732 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 PRRC2BQ5JSZ5 2229 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-229ENST00000510129 CNTNAP2Q9UHC6 1331 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 EYA4O95677 639 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 HSCBQ8IWL3 235 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 HACE1Q8IYU2 909 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 KLHL23Q8NBE8 558 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 IFT74Q96LB3 600 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 ASB2Q96Q27 587 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 TIPINQ9BVW5 301 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 PCDHB2Q9Y5E7 798 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 TRANK1O15050 2925 aa23.63■■□□□ 1.37
UBE2D3-229ENST00000510129 A0A087WWV3 80 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 VWA3AA6NCI4 1184 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 LRRIQ4A6NIV6 560 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 GRM6O15303 877 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 ATF7P17544 494 aaPredicted RBP23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 SYT1P21579 422 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 MBTD1Q05BQ5 628 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 IL17AQ16552 155 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 PDE12Q6L8Q7 609 aaKnown RBP23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 THNSL1Q8IYQ7 743 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 CDK5RAP3Q96JB5 506 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 RNF19AQ9NV58 838 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 PRMT7Q9NVM4 692 aaPredicted RBP23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 KCNG1Q9UIX4 513 aa23.62■■□□□ 1.37
UBE2D3-229ENST00000510129 PHLPP2Q6ZVD8 1323 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 KIAA1671Q9BY89 1806 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 TSPAN1O60635 241 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 HOXA11P31270 313 aaPredicted RBP23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 NAMPTP43490 491 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 CLLU1OSQ5K130 101 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 HYIQ5T013 277 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 CDCA2Q69YH5 1023 aaPredicted RBP23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 MAEAQ7L5Y9 396 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 MRPL10Q7Z7H8 261 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 COLGALT1Q8NBJ5 622 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 SPPL3Q8TCT6 385 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 HELQQ8TDG4 1101 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 ZNF558Q96NG5 402 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 ZSCAN16Q9H4T2 348 aaPredicted RBP23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 CWH43Q9H720 699 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 KCND2Q9NZV8 630 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 KANSL3Q9P2N6 904 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 PUF60Q9UHX1 559 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 LZTS1Q9Y250 596 aa23.61■■□□□ 1.37
UBE2D3-229ENST00000510129 FSD2A1L4K1 749 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 ITGB1P05556 798 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 EFNA5P52803 228 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 KRT17Q04695 432 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 ECM1Q16610 540 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 FAM187BQ17R55 369 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 PPP4R3CPQ6ZMV5 832 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 DEPTORQ8TB45 409 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 URGCPQ8TCY9 931 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 CSRNP2Q9H175 543 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 C17orf75Q9HAS0 396 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 ALG13Q9NP73 1137 aaKnown RBP23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 GPRC5CQ9NQ84 441 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 PRDM6Q9NQX0 595 aa23.6■■□□□ 1.37
UBE2D3-229ENST00000510129 HSP90AA1P07900 732 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 LONP1P36776 959 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 UBA7P41226 1012 aa23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 ALDH7A1P49419 539 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 PLCB3Q01970 1234 aa23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 MAPK6Q16659 721 aa23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 DRC1Q96MC2 740 aa23.59■■□□□ 1.37
UBE2D3-229ENST00000510129 MMTAG2Q9BU76 263 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms