RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 NR5A1Q13285 461 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 KCNC3Q14003 757 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 SMC1AQ14683 1233 aaKnown RBP22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 NCAPH2Q6IBW4 605 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 RNF135Q8IUD6 432 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 KSR1Q8IVT5 923 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 NECAB1Q8N987 351 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 PRPF31Q8WWY3 499 aaKnown RBP22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 TNFRSF25Q93038 417 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 TMEM169Q96HH4 297 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 PHF7Q9BWX1 381 aaPredicted RBP22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 AGPAT5Q9NUQ2 364 aa22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 WRAP73Q9P2S5 460 aaPredicted RBP22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 LOC730098B7Z3J9 87 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 PBX3P40426 434 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 BCAR1P56945 870 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 TRIM29Q14134 588 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 CBX2Q14781 532 aaPredicted RBP22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 PCBP1Q15365 356 aaKnown RBP eCLIP22.3■■□□□ 1.169e-7■□□□□ 10.8
UBE2D3-220ENST00000505307 EARS2Q5JPH6 523 aaKnown RBP22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 MRPL43Q8N983 215 aaKnown RBP22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 VN1R2Q8NFZ6 395 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 SUSD6Q92537 303 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 RGL1Q9NZL6 768 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
UBE2D3-220ENST00000505307 NEK4P51957 841 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 LAMTOR4Q0VGL1 99 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 XKR9Q5GH70 373 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 NOMO2Q5JPE7 1267 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 ANKRD54Q6NXT1 300 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 ZNF579Q8NAF0 562 aaKnown RBP22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 NSUN7Q8NE18 718 aaKnown RBP22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 DYDC2Q96IM9 177 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 STK39Q9UEW8 545 aa22.29■■□□□ 1.16
UBE2D3-220ENST00000505307 HIDE1A8MVS5 230 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 LYPLA2O95372 231 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 SRGAP2CP0DJJ0 459 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 TECP42680 631 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 GIT2Q14161 759 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 MXD4Q14582 209 aaPredicted RBP22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 EMC2Q15006 297 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 CALCRLQ16602 461 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 TPH2Q8IWU9 490 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 CASP10Q92851 521 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 TMEM143Q96AN5 459 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 MUTYHQ9UIF7 546 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 PCDHB2Q9Y5E7 798 aa22.28■■□□□ 1.16
UBE2D3-220ENST00000505307 ZC3H11AO75152 810 aaKnown RBP eCLIP22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 OFD1O75665 1012 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 SLITRK3O94933 977 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 RNASELQ05823 741 aaKnown RBP22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 CTTNQ14247 550 aaKnown RBP22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 TPRNQ4KMQ1 711 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 MRPL10Q7Z7H8 261 aaKnown RBP22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 FERMT3Q86UX7 667 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 CNNM3Q8NE01 707 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 URGCPQ8TCY9 931 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 EDAQ92838 391 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 LPPQ93052 612 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 MTRQ99707 1265 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 HSD17B14Q9BPX1 270 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 EIF2AK1Q9BQI3 630 aaKnown RBP22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 S1PR5Q9H228 398 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 KCNH6Q9H252 994 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 ANKEF1Q9NU02 776 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 TBC1D13Q9NVG8 400 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 KANSL3Q9P2N6 904 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 CNTNAP2Q9UHC6 1331 aa22.27■■□□□ 1.16
UBE2D3-220ENST00000505307 FAM205CA6NFA0 338 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 C2orf71A6NGG8 1288 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 BTBD18B2RXH4 712 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 LARGE1O95461 756 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 AXLP30530 894 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 RBM10P98175 930 aaKnown RBP22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 CYP4A11Q02928 519 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 POU5F1BQ06416 359 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 NCBP1Q09161 790 aaKnown RBP22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 DDX53Q86TM3 631 aaKnown RBP22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 DIS3L2Q8IYB7 885 aaKnown RBP22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 RNF149Q8NC42 400 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 UBN1Q9NPG3 1134 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 IRAK3Q9Y616 596 aa22.26■■□□□ 1.15
UBE2D3-220ENST00000505307 C5orf42Q9H799 3197 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 NT5C1B-RDH14C9J2C7 533 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 NEMFO60524 1076 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 DTNBO60941 627 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 CXCL14O95715 111 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 GALTP07902 379 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 TFDP1Q14186 410 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 SYCE2Q6PIF2 218 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 VPS52Q8N1B4 723 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 TMEM87AQ8NBN3 555 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 CCDC51Q96ER9 411 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 IGSF21Q96ID5 467 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 MFSD14AQ96MC6 490 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 NRDE2Q9H7Z3 1164 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 TTC12Q9H892 705 aaPredicted RBP22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 MINDY3Q9H8M7 445 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 INPP5FQ9Y2H2 1132 aa22.25■■□□□ 1.15
UBE2D3-220ENST00000505307 DGAT1O75907 488 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms