RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 REEP2Q9BRK0 252 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 PARVGQ9HBI0 331 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 PRMT7Q9NVM4 692 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 KBTBD4Q9NVX7 518 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 CXXC1Q9P0U4 656 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 HPSEQ9Y251 543 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 TRIOBPQ9H2D6 2365 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 CCDC169A6NNP5 214 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 SLFN14P0C7P3 912 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 ATP2A2P16615 1042 aaKnown RBP17.65■□□□□ 0.42
SSBP1-214ENST00000498107 AXLP30530 894 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 ABCD1P33897 745 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 PEX3P56589 373 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 MAPK7Q13164 816 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 GIT2Q14161 759 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 LRIT3Q3SXY7 679 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 DAW1Q8N136 415 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 BSNDQ8WZ55 320 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 DDX12PQ92771 950 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 PRIMPOLQ96LW4 560 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 NTPCRQ9BSD7 190 aaKnown RBP17.65■□□□□ 0.42
SSBP1-214ENST00000498107 KMT5AQ9NQR1 393 aa17.65■□□□□ 0.42
SSBP1-214ENST00000498107 NPHP3-ACAD11A0A0J9YXS1 232 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 ENPP3O14638 875 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 CSDE1O75534 798 aaKnown RBP17.64■□□□□ 0.41
SSBP1-214ENST00000498107 GAP43P17677 238 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 NPTX2P47972 431 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 ZNF131P52739 623 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 MBTD1Q05BQ5 628 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 MAPK6Q16659 721 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 TCTN1Q2MV58 587 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 SLC24A5Q71RS6 500 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 MYCT1Q8N699 235 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 TMEM87AQ8NBN3 555 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 MINDY3Q9H8M7 445 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 POLD4Q9HCU8 107 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 RGS18Q9NS28 235 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 AGPAT5Q9NUQ2 364 aa17.64■□□□□ 0.41
SSBP1-214ENST00000498107 PIN4Q9Y237 131 aaKnown RBP17.64■□□□□ 0.41
SSBP1-214ENST00000498107 MYMKA6NI61 221 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 SFI1A8K8P3 1242 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 K7ERI5 159 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 STAG3L1P0CL83 205 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 SKIP12755 728 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 FGFR4P22455 802 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 NDUFA8P51970 172 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
SSBP1-214ENST00000498107 FAM187BQ17R55 369 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 TPRNQ4KMQ1 711 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 DYMQ7RTS9 669 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 MYOCDQ8IZQ8 938 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 CCDC51Q96ER9 411 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 GBP4Q96PP9 640 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 ADAM2Q99965 735 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 TMEM134Q9H6X4 195 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 SEL1LQ9UBV2 794 aa17.63■□□□□ 0.41
SSBP1-214ENST00000498107 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.62■□□□□ 0.41
SSBP1-214ENST00000498107 MYL1P05976 194 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 SARSP49591 514 aaKnown RBP17.62■□□□□ 0.41
SSBP1-214ENST00000498107 RAB27AP51159 221 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 DSC3Q14574 896 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 TWF2Q6IBS0 349 aaKnown RBP17.62■□□□□ 0.41
SSBP1-214ENST00000498107 KANK3Q6NY19 840 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 CNNM4Q6P4Q7 775 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.62■□□□□ 0.412e-8■■■■■ 47
SSBP1-214ENST00000498107 CLEC17AQ6ZS10 378 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 DNAJC19Q96DA6 116 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 C7orf25Q9BPX7 421 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 ZBED2Q9BTP6 218 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 TRAIPQ9BWF2 469 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 TRIM9Q9C026 710 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 FZD8Q9H461 694 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 ARHGAP28Q9P2N2 729 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 SERTAD1Q9UHV2 236 aa17.62■□□□□ 0.41
SSBP1-214ENST00000498107 TTC3P53804 2025 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 ACKR2O00590 384 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 ACTN4O43707 911 aaKnown RBP17.61■□□□□ 0.41
SSBP1-214ENST00000498107 TRAK2O60296 914 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 TSPAN1O60635 241 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 ZNF202O95125 648 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 PRKCBP05771 671 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 MAPTP10636 758 aaKnown RBP17.61■□□□□ 0.41
SSBP1-214ENST00000498107 IDEP14735 1019 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 NCKAP1LP55160 1127 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 SMAD3P84022 425 aaKnown RBP17.61■□□□□ 0.41
SSBP1-214ENST00000498107 STRN3Q13033 797 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 PRPF4BQ13523 1007 aaKnown RBP17.61■□□□□ 0.41
SSBP1-214ENST00000498107 RAB30Q15771 203 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 TMEM132AQ24JP5 1023 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 APBB1IPQ7Z5R6 666 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-214ENST00000498107 RTN4RL1Q86UN2 441 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-214ENST00000498107 NPAS4Q8IUM7 802 aa17.61■□□□□ 0.41
SSBP1-214ENST00000498107 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms