RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.77
GAPVD1-219ENST00000495955 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
GAPVD1-219ENST00000495955 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.77
GAPVD1-219ENST00000495955 A0A087WZ62 844 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 RPLP2P05387 115 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 SMIM10L2AP0DMW4 78 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 SMIM10L2BP0DMW5 78 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 LBX1P52954 281 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 KCNB1Q14721 858 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 GPAT2Q6NUI2 795 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 OR6B3Q8NGW1 331 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 SEPT8Q92599 483 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 FDXACB1Q9BRP7 624 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 UBE2TQ9NPD8 197 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 PGAP2Q9UHJ9 254 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 IKBKBO14920 756 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 CSDE1O75534 798 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 CCDC117Q8IWD4 279 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 NUCKS1Q9H1E3 243 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 DBR1Q9UK59 544 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 CCDC175P0C221 793 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 ELF1P32519 619 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 VAMP7P51809 220 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 LAMTOR4Q0VGL1 99 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 PLCB4Q15147 1175 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF667Q5HYK9 610 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 CYP26C1Q6V0L0 522 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 MTMR9Q96QG7 549 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 TARS2Q9BW92 718 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 C17orf75Q9HAS0 396 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 HSPBP1Q9NZL4 362 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 ZBTB39O15060 712 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 SEPT4O43236 478 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 LRRN2O75325 713 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 FARP2O94887 1054 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 MRPS9P82933 396 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 MAP3K10Q02779 954 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 LMBRD2Q68DH5 695 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 TAF2Q6P1X5 1199 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 DCUN1D2Q6PH85 259 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 GLB1LQ6UWU2 654 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 EHBP1Q8NDI1 1231 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 HAS1Q92839 578 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 INPP4AQ96PE3 977 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 CASZ1Q86V15 1759 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 SYNGAP1Q96PV0 1343 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 SMPD1P17405 629 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 NAMPTP43490 491 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 PTK2Q05397 1052 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF699Q32M78 642 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 THEM5Q8N1Q8 247 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 FAM133AQ8N9E0 248 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 LMBR1Q8WVP7 490 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 IQCDQ96DY2 449 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 MAF1Q9H063 256 aa10.26□□□□□ -0.77
GAPVD1-219ENST00000495955 GOLGA6L9A6NEM1 432 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 HUS1O60921 280 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 MMP3P08254 477 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NOLC1Q14978 699 aaKnown RBP eCLIP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 TCP11X2Q5H9J9 407 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 IQCEQ6IPM2 695 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 CTU1Q7Z7A3 348 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 CPB2Q96IY4 423 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 CGNQ9P2M7 1197 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 MORF4L1Q9UBU8 362 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF536O15090 1300 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NRCAMQ92823 1304 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 KIF3CO14782 793 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 THAP12O43422 761 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 KRT86O43790 486 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 DUSP11O75319 330 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 GHRP10912 638 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 RARRES1P49788 294 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 ADKP55263 362 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 STK4Q13043 487 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 ITGB3BPQ13352 177 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 KCNA10Q16322 511 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 PTPN21Q16825 1174 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NECAB2Q7Z6G3 386 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 CCDC50Q8IVM0 306 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NPLOC4Q8TAT6 608 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 MTMR8Q96EF0 704 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 TBX20Q9UMR3 447 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 GUCA1BQ9UMX6 200 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 PDXKO00764 312 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NPTX2P47972 431 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 GRB14Q14449 540 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 HSDL1Q3SXM5 330 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 HEXIM2Q96MH2 286 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NDST4Q9H3R1 872 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 MYO1AQ9UBC5 1043 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 C1QTNF8P60827 252 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 NBPF20Q3BBV1 942 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms