RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 KCNK3O14649 394 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
CHTOP-206ENST00000495554 KRT13P13646 458 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 PLS3P13797 630 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 RFX1P22670 979 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 DSG3P32926 999 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 NPEPPSP55786 919 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 MRPS25P82663 173 aaKnown RBP16.06■□□□□ 0.16
CHTOP-206ENST00000495554 INTS8Q75QN2 995 aaKnown RBP16.06■□□□□ 0.16
CHTOP-206ENST00000495554 MAEAQ7L5Y9 396 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 USP38Q8NB14 1042 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 TPCN2Q8NHX9 752 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 SLC30A5Q8TAD4 765 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 GGCXP38435 758 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 PLS1Q14651 629 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 SYCE1Q8N0S2 351 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 U2AF1L4Q8WU68 220 aaKnown RBP16.06■□□□□ 0.16
CHTOP-206ENST00000495554 ACCSQ96QU6 501 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 TIPINQ9BVW5 301 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 GGA3Q9NZ52 723 aa16.06■□□□□ 0.16
CHTOP-206ENST00000495554 ZNF214Q9UL59 606 aaPredicted RBP16.06■□□□□ 0.16
CHTOP-206ENST00000495554 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
CHTOP-206ENST00000495554 PHIPQ8WWQ0 1821 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
CHTOP-206ENST00000495554 SLFN11Q7Z7L1 901 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 C12orf56Q8IXR9 622 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 GOLGA6L1Q8N7Z2 621 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 RDH13Q8NBN7 331 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 CAVIN3Q969G5 261 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
CHTOP-206ENST00000495554 FAM204AQ9H8W3 233 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 GDF3Q9NR23 364 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 CCNE2O96020 404 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 TNNC1P63316 161 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 CETN1Q12798 172 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 VSIG10LQ86VR7 867 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 GPR88Q9GZN0 384 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 ST6GALNAC4Q9H4F1 302 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 CALCOCO1Q9P1Z2 691 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 TMEM59LQ9UK28 342 aa16.05■□□□□ 0.16
CHTOP-206ENST00000495554 COL11A1P12107 1806 aaPredicted RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 C19orf81C9J6K1 198 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 AGPSO00116 658 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 GLI1P08151 1106 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 NNTQ13423 1086 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 TMEM132BQ14DG7 1078 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 UGCGQ16739 394 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 PEX26Q7Z412 305 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 KRT12Q99456 494 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 MYH11P35749 1972 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 P4HA2O15460 535 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 HEXIM1O94992 359 aaKnown RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 JAK3P52333 1124 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 GALCP54803 685 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 SNRPFP62306 86 aaKnown RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 GTF2BQ00403 316 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 SNRNP48Q6IEG0 339 aaKnown RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 DLK2Q6UY11 383 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 GPC2Q8N158 579 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 SH2D3AQ9BRG2 576 aa16.04■□□□□ 0.16
CHTOP-206ENST00000495554 SUCLA2Q9P2R7 463 aaPredicted RBP16.04■□□□□ 0.16
CHTOP-206ENST00000495554 TMEM150BA6NC51 233 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 SFNP31947 248 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 VAMP7P51809 220 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 PSMC5P62195 406 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 PHLDB3Q6NSJ2 640 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 LMO3Q8TAP4 145 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 VTI1AQ96AJ9 217 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 GOLPH3Q9H4A6 298 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 MAPK13O15264 365 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 NR3C2P08235 984 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 TMEM253P0C7T8 217 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 CAPN2P17655 700 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 RNASE9P60153 205 aaKnown RBP16.03■□□□□ 0.16
CHTOP-206ENST00000495554 GUCY2DQ02846 1103 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 PAK2Q13177 524 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 AFAP1L1Q8TED9 768 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 CALR3Q96L12 384 aaKnown RBP16.03■□□□□ 0.16
CHTOP-206ENST00000495554 PCIF1Q9H4Z3 704 aa16.03■□□□□ 0.16
CHTOP-206ENST00000495554 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 557.9 ms