RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 LRRC27Q9C0I9 530 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 POLD4Q9HCU8 107 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 DACT1Q9NYF0 836 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
ATG4B-219ENST00000479941 MSRAQ9UJ68 235 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
ATG4B-219ENST00000479941 PHLPP2Q6ZVD8 1323 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 RBAK-RBAKDNI3L0D1 243 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 SOX1O00570 391 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-219ENST00000479941 MGEA5O60502 916 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 STAG3L1P0CL83 205 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 PLS3P13797 630 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 AXLP30530 894 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 SARSP49591 514 aaKnown RBP11.96□□□□□ -0.49
ATG4B-219ENST00000479941 SMTNP53814 917 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 MBTD1Q05BQ5 628 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 MAPK7Q13164 816 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 GIT2Q14161 759 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 E2F4Q16254 413 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 RAD9AQ99638 391 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 REEP2Q9BRK0 252 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 NTPCRQ9BSD7 190 aaKnown RBP11.96□□□□□ -0.49
ATG4B-219ENST00000479941 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 TNMDQ9H2S6 317 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 FZD8Q9H461 694 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 MAGEF1Q9HAY2 307 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 AGPAT5Q9NUQ2 364 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-219ENST00000479941 KCNH3Q9ULD8 1083 aa11.96□□□□□ -0.49
ATG4B-219ENST00000479941 PIN4Q9Y237 131 aaKnown RBP11.96□□□□□ -0.49
ATG4B-219ENST00000479941 TTC3P53804 2025 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 NPHP3-ACAD11A0A0J9YXS1 232 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 A0A0U1RQF3 1178 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 CCDC169A6NNP5 214 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 SFI1A8K8P3 1242 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 C9IYK1 514 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 POLR2DO15514 142 aaKnown RBP11.95□□□□□ -0.5
ATG4B-219ENST00000479941 TLL1O43897 1013 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 TSPAN1O60635 241 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
ATG4B-219ENST00000479941 FAM13AO94988 1023 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 UPP2O95045 317 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 SKIP12755 728 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 SCP2P22307 547 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 DNAJB2P25686 324 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 NPTX2P47972 431 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 FXR1P51114 621 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATG4B-219ENST00000479941 ZNF131P52739 623 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 PEX3P56589 373 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 FAM189BP81408 668 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 HTRA4P83105 476 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-219ENST00000479941 AMPD3Q01432 767 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-219ENST00000479941 MAPK6Q16659 721 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 AMHR2Q16671 573 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 FAM187BQ17R55 369 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 NPAS4Q8IUM7 802 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 CRIPAKQ8N1N5 446 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 DHX58Q96C10 678 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 CCDC51Q96ER9 411 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
ATG4B-219ENST00000479941 PARVGQ9HBI0 331 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 GDPD2Q9HCC8 539 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 KMT5AQ9NQR1 393 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM161AQ9NX61 479 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 INSL6Q9Y581 213 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 PCDHB7Q9Y5E2 793 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 CDH23Q9H251 3354 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 TCHHQ07283 1943 aa11.95□□□□□ -0.5
ATG4B-219ENST00000479941 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 A0A1B0GVL5 298 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 GOLGA6L4A6NEF3 574 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 MYMKA6NI61 221 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 H0YCG3 227 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 K7ERI5 159 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 ACKR2O00590 384 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 PRKCBP05771 671 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 PFKFB1P16118 471 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-219ENST00000479941 PBX2P40425 430 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 RAB27AP51159 221 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 RABGGTBP53611 331 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 TWF2Q6IBS0 349 aaKnown RBP11.94□□□□□ -0.5
ATG4B-219ENST00000479941 FAM117BQ6P1L5 589 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-219ENST00000479941 MYCT1Q8N699 235 aa11.94□□□□□ -0.5
ATG4B-219ENST00000479941 MRPS27Q92552 414 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms