RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	TSGA10IP	Q3SY00	556 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	CREB3L3	Q68CJ9	461 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	NIPA1	Q7RTP0	329 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	ZNF598	Q86UK7	904 aa	Known RBP	13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	GPR152	Q8TDT2	470 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	PIBF1	Q8WXW3	757 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	KCNB2	Q92953	911 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	KLHL5	Q96PQ7	755 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	MTA3	Q9BTC8	594 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	INO80B	Q9C086	356 aa	Predicted RBP	13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	EPC1	Q9H2F5	836 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	PLEKHA4	Q9H4M7	779 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	KANSL3	Q9P2N6	904 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	DOCK8	Q8NF50	2099 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	CCDC195	A0A1B0GUA6	201 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	KANSL1L	A0AUZ9	987 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	SLC27A2	O14975	620 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	GLUD1	P00367	558 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	VTN	P04004	478 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	HMGB1	P09429	215 aa	Known RBP	13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	NRL	P54845	237 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	RABEP1	Q15276	862 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	SLC35G1	Q2M3R5	365 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	ABHD15	Q6UXT9	468 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	NCOA7	Q8NI08	942 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	URGCP	Q8TCY9	931 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	PGBD4	Q96DM1	585 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	FAM193B	Q96PV7	902 aa	Predicted RBP	13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	PIDD1	Q9HB75	910 aa		13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	SMG5	Q9UPR3	1016 aa	Known RBP	13.86	□□□□□ -0.19
SBF1-208	ENST00000477234	ALDH2	P05091	517 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	UROD	P06132	367 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	GALT	P07902	379 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	CALM1	P0DP23	149 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	CALM2	P0DP24	149 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	CALM3	P0DP25	149 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	SFPQ	P23246	707 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	ZNF76	P36508	570 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	NOMO2	Q5JPE7	1267 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	KANK3	Q6NY19	840 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	CYB5R4	Q7L1T6	521 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	ZBTB44	Q8NCP5	570 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	AUTS2	Q8WXX7	1259 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	TMEM175	Q9BSA9	504 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	TM6SF1	Q9BZW5	370 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	AGO4	Q9HCK5	861 aa	Known RBP	13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	MAN1C1	Q9NR34	630 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	TBC1D22B	Q9NU19	505 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	ZDHHC7	Q9NXF8	308 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	MRPS17	Q9Y2R5	130 aa	Known RBP	13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	USP24	Q9UPU5	2620 aa		13.85	□□□□□ -0.19
SBF1-208	ENST00000477234	CFAP47	Q6ZTR5	3102 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	DCDC2B	A2VCK2	349 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	ANHX	E9PGG2	379 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	SLC30A4	O14863	429 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	INPPL1	O15357	1258 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	PSAP	P07602	524 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	CYP21A2	P08686	494 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	CNP	P09543	421 aa	Known RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	LAMP2	P13473	410 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	DARS	P14868	501 aa	Known RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	CSTF1	Q05048	431 aa	Known RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	ZBTB41	Q5SVQ8	909 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	SWSAP1	Q6NVH7	229 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	EFCAB12	Q6NXP0	572 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	MTSS1L	Q765P7	747 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	SMG7	Q92540	1137 aa	Known RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	PPP1R16B	Q96T49	567 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	LY9	Q9HBG7	655 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	NRBP2	Q9NSY0	501 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	ANGPTL2	Q9UKU9	493 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	SNX14	Q9Y5W7	946 aa		13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	CNOT1	A5YKK6	2376 aa	Known RBP	13.84	□□□□□ -0.19
SBF1-208	ENST00000477234	MEIS1	O00470	390 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	LILRB5	O75023	590 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	ZNF623	O75123	536 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	PAPLN	O95428	1278 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	PHKA2	P46019	1235 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	DNM2	P50570	870 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	CREM	Q03060	361 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	AP3B2	Q13367	1082 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	PPM1J	Q5JR12	505 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	TWF2	Q6IBS0	349 aa	Known RBP	13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	GPR65	Q8IYL9	337 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	NLRP7	Q8WX94	980 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	RSAD2	Q8WXG1	361 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	IER2	Q9BTL4	223 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	ADAMTS10	Q9H324	1103 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	NRDE2	Q9H7Z3	1164 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	TBC1D13	Q9NVG8	400 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	FAN1	Q9Y2M0	1017 aa		13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	RBM19	Q9Y4C8	960 aa	Known RBP	13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.83	□□□□□ -0.2
SBF1-208	ENST00000477234	ZBTB42	B2RXF5	422 aa		13.82	□□□□□ -0.2
SBF1-208	ENST00000477234	N4BP1	O75113	896 aa	Known RBP	13.82	□□□□□ -0.2
SBF1-208	ENST00000477234	NR1I2	O75469	434 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms