RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TRAIPQ9BWF2 469 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 AAASQ9NRG9 546 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 TYW1Q9NV66 732 aaKnown RBP26.65■■□□□ 1.86
CPNE1-223ENST00000475146 EYSQ5T1H1 3165 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 POU5F1BQ06416 359 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 LONRF3Q496Y0 759 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 CLLU1OSQ5K130 101 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 IFNLR1Q8IU57 520 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-223ENST00000475146 LRRC43Q8N309 656 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 HELQQ8TDG4 1101 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 P2RX5Q93086 422 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 LMAN2LQ9H0V9 348 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 ALG13Q9NP73 1137 aaKnown RBP26.64■■□□□ 1.86
CPNE1-223ENST00000475146 PCDHB12Q9Y5F1 795 aa26.64■■□□□ 1.86
CPNE1-223ENST00000475146 BMP15O95972 392 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 MBTD1Q05BQ5 628 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 NCBP1Q09161 790 aaKnown RBP26.63■■□□□ 1.85
CPNE1-223ENST00000475146 PCBP1Q15365 356 aaKnown RBP eCLIP26.63■■□□□ 1.85
CPNE1-223ENST00000475146 NAALADL2Q58DX5 795 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 KLHL23Q8NBE8 558 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 LPPQ93052 612 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 PLAGL2Q9UPG8 496 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 DNM3Q9UQ16 869 aa26.63■■□□□ 1.85
CPNE1-223ENST00000475146 TSPAN1O60635 241 aa26.62■■□□□ 1.85
CPNE1-223ENST00000475146 ITGB1P05556 798 aa26.62■■□□□ 1.85
CPNE1-223ENST00000475146 LAG3P18627 525 aa26.62■■□□□ 1.85
CPNE1-223ENST00000475146 HOXA11P31270 313 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-223ENST00000475146 ATXN2LQ8WWM7 1075 aaKnown RBP26.62■■□□□ 1.85
CPNE1-223ENST00000475146 MMTAG2Q9BU76 263 aaKnown RBP26.62■■□□□ 1.85
CPNE1-223ENST00000475146 NFKBIZQ9BYH8 718 aa26.62■■□□□ 1.85
CPNE1-223ENST00000475146 PCDHB2Q9Y5E7 798 aa26.62■■□□□ 1.85
CPNE1-223ENST00000475146 E9PMD0 336 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 EYA4O95677 639 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 RESTQ13127 1097 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 SF3A1Q15459 793 aaKnown RBP26.61■■□□□ 1.85
CPNE1-223ENST00000475146 ZBTB8OSQ8IWT0 167 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 THNSL1Q8IYQ7 743 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 COLGALT1Q8NBJ5 622 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 PGBD4Q96DM1 585 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 CPB2Q96IY4 423 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 CDK5RAP3Q96JB5 506 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 NSUN3Q9H649 340 aaKnown RBP26.61■■□□□ 1.85
CPNE1-223ENST00000475146 CWH43Q9H720 699 aa26.61■■□□□ 1.85
CPNE1-223ENST00000475146 ZNF623O75123 536 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 AXLP30530 894 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 MRPS5P82675 430 aaKnown RBP26.6■■□□□ 1.85
CPNE1-223ENST00000475146 NOTUMQ6P988 496 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 GLB1LQ6UWU2 654 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 LRRC55Q6ZSA7 311 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 BSNDQ8WZ55 320 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 MRPL9Q9BYD2 267 aaKnown RBP26.6■■□□□ 1.85
CPNE1-223ENST00000475146 COG5Q9UP83 839 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 INPP5FQ9Y2H2 1132 aa26.6■■□□□ 1.85
CPNE1-223ENST00000475146 MEIS3P2A8K0S8 358 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 HSP90AA1P07900 732 aaKnown RBP26.59■■□□□ 1.85
CPNE1-223ENST00000475146 PPP2R5AQ15172 486 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 CSPP1Q1MSJ5 1256 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 TCEAL5Q5H9L2 206 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 UBXN11Q5T124 520 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 DEPTORQ8TB45 409 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 SPPL3Q8TCT6 385 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 POF1BQ8WVV4 589 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 HLA-CQ95604 372 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 CCDC51Q96ER9 411 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 PLIN2Q99541 437 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 MTMR6Q9Y217 621 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 TRANK1O15050 2925 aa26.59■■□□□ 1.85
CPNE1-223ENST00000475146 NAMPTP43490 491 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 TFF2Q03403 129 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 AMHR2Q16671 573 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 TJAP1Q5JTD0 557 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 KCNK18Q7Z418 384 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 CABP7Q86V35 215 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 KIFAP3Q92845 792 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 IFT74Q96LB3 600 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 AK8Q96MA6 479 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 ZNF558Q96NG5 402 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 ASB2Q96Q27 587 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 NT5C3AQ9H0P0 336 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 C2orf40Q9H1Z8 148 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 POLD4Q9HCU8 107 aa26.58■■□□□ 1.85
CPNE1-223ENST00000475146 PRUNE2Q8WUY3 3088 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 B4GALT5O43286 388 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 STX6O43752 255 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 FGF18O76093 207 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 SSBP05455 408 aaKnown RBP eCLIP26.57■■□□□ 1.84
CPNE1-223ENST00000475146 ARF4P18085 180 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-223ENST00000475146 AAK1Q2M2I8 961 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 HYIQ5T013 277 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 CDCA2Q69YH5 1023 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-223ENST00000475146 FAM173BQ6P4H8 233 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 RSPH1Q8WYR4 309 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 PNMA5Q96PV4 448 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 EIF2AQ9BY44 585 aaKnown RBP26.57■■□□□ 1.84
CPNE1-223ENST00000475146 CSRNP2Q9H175 543 aa26.57■■□□□ 1.84
CPNE1-223ENST00000475146 PRMT7Q9NVM4 692 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-223ENST00000475146 LIG1P18858 919 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 DNAJB1P25685 340 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 PBX3P40426 434 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 TMEM132AQ24JP5 1023 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms