RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 CEP250Q9BV73 2442 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 LCHNA4D1U4 455 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 LINC01553A4QN01 128 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 SRRM3A6NNA2 597 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 H3BNC9 293 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 NFIBO00712 420 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 SLC30A4O14863 429 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 PEX10O60683 326 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 DUSP11O75319 330 aaKnown RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 GJB5O95377 273 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 EYA4O95677 639 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 BRD1O95696 1058 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 CST3P01034 146 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ASNSP08243 561 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 FCER1AP12319 257 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ATF7P17544 494 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 IFIT5Q13325 482 aaKnown RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 BFSP2Q13515 415 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ZNF746Q6NUN9 644 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 CDC42EP5Q6NZY7 148 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 SV2BQ7L1I2 683 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ABRAQ8N0Z2 381 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 KREMEN2Q8NCW0 462 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 KLHDC9Q8NEP7 349 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 UBE2FQ969M7 185 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 MAML3Q96JK9 1138 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 FEZ1Q99689 392 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 WNT8AQ9H1J5 351 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 MROH8Q9H579 483 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 INCENPQ9NQS7 918 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 CNNM1Q9NRU3 951 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 BABAM1Q9NWV8 329 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 SLAMF8Q9P0V8 285 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ZSWIM5Q9P217 1185 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ZHX1Q9UKY1 873 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 RAB23Q9ULC3 237 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 SPTBN2O15020 2390 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 COL4A4P53420 1690 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-213ENST00000471667 DMDP11532 3685 aa4.5□□□□□ -1.69
LRCH3-213ENST00000471667 ZFYVE26Q68DK2 2539 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 UMODL1Q5DID0 1318 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 CHD7Q9P2D1 2997 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 RBAK-RBAKDNI3L0D1 243 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ARHGAP6O43182 974 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 PARNO95453 639 aaKnown RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ZSCAN22P10073 491 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 CYP7A1P22680 504 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 GYG1P46976 350 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 RGS3P49796 1198 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 USP14P54578 494 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 COASYQ13057 564 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ITGA7Q13683 1181 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 UBE4AQ14139 1066 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 LRRFIP1Q32MZ4 808 aaKnown RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 EPC2Q52LR7 807 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 SOWAHCQ53LP3 525 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 TTBK2Q6IQ55 1244 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 NOL8Q76FK4 1167 aaKnown RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 TTC6Q86TZ1 520 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 SIAH1Q8IUQ4 282 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 MSL3Q8N5Y2 521 aaKnown RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ABHD4Q8TB40 342 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 WDR66Q8TBY9 1149 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 SPATA18Q8TC71 538 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ATRIPQ8WXE1 791 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ZCCHC14Q8WYQ9 949 aaKnown RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 ASB16Q96NS5 453 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 TINF2Q9BSI4 451 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 C11orf84Q9BUA3 381 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 CHMP4AQ9BY43 222 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 GINM1Q9NU53 330 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 FBXL21Q9UKT6 434 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 DIS3Q9Y2L1 958 aaKnown RBP4.49□□□□□ -1.69
LRCH3-213ENST00000471667 RWDD3Q9Y3V2 267 aa4.49□□□□□ -1.69
LRCH3-213ENST00000471667 MROH7-TTC4A0A0A0MT08 1334 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 LOC285556D6RIA3 1793 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 DNAJC25-GNG10A0A024R161 153 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 ENO4A6NNW6 628 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 NPIPB6E9PJ23 425 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 B4GALT4O60513 344 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 AMHP03971 560 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 HOXB7P09629 217 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 RAC2P15153 192 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 LTBRP36941 435 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 KIR3DL1P43629 444 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 RRP1P56182 461 aaKnown RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 WDR5P61964 334 aaKnown RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 TNK2Q07912 1038 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 PICALMQ13492 652 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 PLS1Q14651 629 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 LBX2Q6XYB7 198 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 ZNF605Q86T29 641 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 CDH24Q86UP0 819 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 MB21D1Q8N884 522 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 SMRP1Q8NCR6 262 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 COX4I2Q96KJ9 171 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 MMP19Q99542 508 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 C17orf80Q9BSJ5 609 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 IDI2Q9BXS1 227 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms