RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 ZNF623O75123 536 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 CD2BP2O95400 341 aaKnown RBP23.33■■□□□ 1.33
SREBF1-210ENST00000471445 SRGAP2CP0DJJ0 459 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 U2AF2P26368 475 aaKnown RBP eCLIP23.33■■□□□ 1.33
SREBF1-210ENST00000471445 MXD4Q14582 209 aaPredicted RBP23.33■■□□□ 1.33
SREBF1-210ENST00000471445 KCNT2Q6UVM3 1135 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 EP400NLQ6ZTU2 488 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 IFNLR1Q8IU57 520 aaPredicted RBP23.33■■□□□ 1.33
SREBF1-210ENST00000471445 PIGOQ8TEQ8 1089 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 CCDC43Q96MW1 224 aaKnown RBP23.33■■□□□ 1.33
SREBF1-210ENST00000471445 ZNF558Q96NG5 402 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 NOL7Q9UMY1 257 aaKnown RBP23.33■■□□□ 1.33
SREBF1-210ENST00000471445 LZTS1Q9Y250 596 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 PCDHGC5Q9Y5F6 944 aa23.33■■□□□ 1.33
SREBF1-210ENST00000471445 FSCN2O14926 492 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 LINC01565O15544 149 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 MED24O75448 989 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 XRCC6P12956 609 aaKnown RBP eCLIP23.32■■□□□ 1.32
SREBF1-210ENST00000471445 PPM1AP35813 382 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 TECP42680 631 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 DLX2Q07687 328 aaPredicted RBP23.32■■□□□ 1.32
SREBF1-210ENST00000471445 CATSPER3Q86XQ3 398 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 MRPS27Q92552 414 aaKnown RBP23.32■■□□□ 1.32
SREBF1-210ENST00000471445 LPPQ93052 612 aa23.32■■□□□ 1.32
SREBF1-210ENST00000471445 POLR3CQ9BUI4 534 aaPredicted RBP23.32■■□□□ 1.32
SREBF1-210ENST00000471445 MEIS3P2A8K0S8 358 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 ARL2P36404 184 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 PBX3P40426 434 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 PTENP60484 403 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 POU5F1BQ06416 359 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 CAPSQ13938 189 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 NBR1Q14596 966 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 ASAP3Q8TDY4 903 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 TMX3Q96JJ7 454 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 TBC1D32Q96NH3 1257 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 KIF3AQ9Y496 699 aa23.31■■□□□ 1.32
SREBF1-210ENST00000471445 USO1O60763 962 aaKnown RBP23.3■■□□□ 1.32
SREBF1-210ENST00000471445 HOXA11P31270 313 aaPredicted RBP23.3■■□□□ 1.32
SREBF1-210ENST00000471445 ERVFC1P60507 584 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 ADAM15Q13444 863 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 TFDP1Q14186 410 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 PCBP1Q15365 356 aaKnown RBP eCLIP23.3■■□□□ 1.326e-9■■■■■ 51
SREBF1-210ENST00000471445 UBXN11Q5T124 520 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 PDE12Q6L8Q7 609 aaKnown RBP23.3■■□□□ 1.32
SREBF1-210ENST00000471445 FAM178BQ8IXR5 827 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 SLC39A11Q8N1S5 342 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 EFHBQ8N7U6 833 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 C4orf32Q8N8J7 132 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 NFKBIZQ9BYH8 718 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 IGFLR1Q9H665 355 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 DBR1Q9UK59 544 aaKnown RBP23.3■■□□□ 1.32
SREBF1-210ENST00000471445 PCDHB2Q9Y5E7 798 aa23.3■■□□□ 1.32
SREBF1-210ENST00000471445 A0A087WWV3 80 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 TSPAN1O60635 241 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 ERLIN2O94905 339 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 GLRA2P23416 452 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 RPA1P27694 616 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 NRIP1P48552 1158 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 TOB1P50616 345 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-210ENST00000471445 FXR2P51116 673 aaKnown RBP eCLIP23.29■■□□□ 1.32
SREBF1-210ENST00000471445 HAUS3Q68CZ6 603 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 POTEGQ6S5H5 508 aa23.29■■□□□ 1.32
SREBF1-210ENST00000471445 POLR3FQ9H1D9 316 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-210ENST00000471445 TDRD15B5MCY1 1934 aaKnown RBP23.28■■□□□ 1.32
SREBF1-210ENST00000471445 GLP2RO95838 553 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 NDUFV1P49821 464 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 MBTD1Q05BQ5 628 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 GLB1LQ6UWU2 654 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 AGMOQ6ZNB7 445 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 MRPL10Q7Z7H8 261 aaKnown RBP23.28■■□□□ 1.32
SREBF1-210ENST00000471445 PGBD4Q96DM1 585 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 CD320Q9NPF0 282 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 TBC1D13Q9NVG8 400 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 SPG21Q9NZD8 308 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 FAM50BQ9Y247 325 aa23.28■■□□□ 1.32
SREBF1-210ENST00000471445 OFD1O75665 1012 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 MUTP22033 750 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 AXLP30530 894 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 MCM2P49736 904 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 BCAR1P56945 870 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 SMAD4Q13485 552 aaKnown RBP23.27■■□□□ 1.32
SREBF1-210ENST00000471445 AMHR2Q16671 573 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 DUSP6Q16828 381 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 LONRF3Q496Y0 759 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 NOMO2Q5JPE7 1267 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 RBM23Q86U06 439 aaKnown RBP23.27■■□□□ 1.32
SREBF1-210ENST00000471445 MCPH1Q8NEM0 835 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 MICAL1Q8TDZ2 1067 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 CCDC51Q96ER9 411 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 MSLNLQ96KJ4 702 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 NACC1Q96RE7 527 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 TCF25Q9BQ70 676 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 GPRC5CQ9NQ84 441 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 CLEC1BQ9P126 229 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 PUF60Q9UHX1 559 aaKnown RBP23.27■■□□□ 1.32
SREBF1-210ENST00000471445 PCDHB6Q9Y5E3 794 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 CNTNAP2Q9UHC6 1331 aa23.27■■□□□ 1.32
SREBF1-210ENST00000471445 FSD2A1L4K1 749 aa23.26■■□□□ 1.31
SREBF1-210ENST00000471445 INO80B-WBP1J3KQ70 363 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 814.5 ms