RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
FDPS-208ENST00000470171 PPM1EQ8WY54 764 aa17.13■□□□□ 0.33
FDPS-208ENST00000470171 IFT74Q96LB3 600 aa17.13■□□□□ 0.33
FDPS-208ENST00000470171 NSUN3Q9H649 340 aaKnown RBP17.13■□□□□ 0.33
FDPS-208ENST00000470171 PRMT7Q9NVM4 692 aaPredicted RBP17.13■□□□□ 0.33
FDPS-208ENST00000470171 CHD7Q9P2D1 2997 aa17.13■□□□□ 0.33
FDPS-208ENST00000470171 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
FDPS-208ENST00000470171 USO1O60763 962 aaKnown RBP17.12■□□□□ 0.33
FDPS-208ENST00000470171 EYA4O95677 639 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 NAMPTP43490 491 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 PLCB3Q01970 1234 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 KRT17Q04695 432 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 CCDC85BQ15834 202 aaPredicted RBP17.12■□□□□ 0.33
FDPS-208ENST00000470171 FAM187BQ17R55 369 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 FAM102BQ5T8I3 360 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 APBB1IPQ7Z5R6 666 aaPredicted RBP17.12■□□□□ 0.33
FDPS-208ENST00000470171 MRPL10Q7Z7H8 261 aaKnown RBP17.12■□□□□ 0.33
FDPS-208ENST00000470171 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 MICALL1Q8N3F8 863 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 CASD1Q96PB1 797 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 ZMYM2Q9UBW7 1377 aa17.12■□□□□ 0.33
FDPS-208ENST00000470171 INO80B-WBP1J3KQ70 363 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 GLRA2P23416 452 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
FDPS-208ENST00000470171 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
FDPS-208ENST00000470171 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
FDPS-208ENST00000470171 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
FDPS-208ENST00000470171 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
FDPS-208ENST00000470171 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
FDPS-208ENST00000470171 PCDHB2Q9Y5E7 798 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 MICAL3Q7RTP6 2002 aa17.11■□□□□ 0.33
FDPS-208ENST00000470171 TRANK1O15050 2925 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 TTC3P53804 2025 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 SYT1P21579 422 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 ALDH7A1P49419 539 aaKnown RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 CAPSQ13938 189 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 NBR1Q14596 966 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 PAN2Q504Q3 1202 aaKnown RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 ZNF668Q96K58 619 aaPredicted RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 CDCA3Q99618 268 aaPredicted RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 NGRNQ9NPE2 291 aaKnown RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 FAM50BQ9Y247 325 aa17.1■□□□□ 0.33
FDPS-208ENST00000470171 RBM19Q9Y4C8 960 aaKnown RBP17.1■□□□□ 0.33
FDPS-208ENST00000470171 MYH9P35579 1960 aaKnown RBP17.09■□□□□ 0.33
FDPS-208ENST00000470171 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.09■□□□□ 0.33
FDPS-208ENST00000470171 A0A1B0GUA9 196 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
FDPS-208ENST00000470171 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
FDPS-208ENST00000470171 FGFR1P11362 822 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 FGFR4P22455 802 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 ABCD1P33897 745 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 UBA7P41226 1012 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 COL19A1Q14993 1142 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 MAPK6Q16659 721 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 SPRED2Q7Z698 418 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 KLHL23Q8NBE8 558 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 DEPTORQ8TB45 409 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 SPPL3Q8TCT6 385 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 TRIM6Q9C030 488 aaPredicted RBP17.09■□□□□ 0.33
FDPS-208ENST00000470171 FZD8Q9H461 694 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
FDPS-208ENST00000470171 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 LRRIQ4A6NIV6 560 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 H0YCG3 227 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 INPPL1O15357 1258 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 TSPAN1O60635 241 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 ITGB1P05556 798 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
FDPS-208ENST00000470171 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 GIT2Q14161 759 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 KCNT2Q6UVM3 1135 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 ASAP3Q8TDY4 903 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 PABPC5Q96DU9 382 aaKnown RBP17.08■□□□□ 0.32
FDPS-208ENST00000470171 CWH43Q9H720 699 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 MINDY3Q9H8M7 445 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 GIT1Q9Y2X7 761 aa17.08■□□□□ 0.32
FDPS-208ENST00000470171 ACKR2O00590 384 aa17.07■□□□□ 0.32
FDPS-208ENST00000470171 N4BP3O15049 544 aa17.07■□□□□ 0.32
FDPS-208ENST00000470171 GRM6O15303 877 aa17.07■□□□□ 0.32
FDPS-208ENST00000470171 STX6O43752 255 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms