RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 DEPTORQ8TB45 409 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 APBB2Q92870 758 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 ST6GALNAC4Q9H4F1 302 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 POLD4Q9HCU8 107 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 IL23AQ9NPF7 189 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 KMT5AQ9NQR1 393 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 PANK4Q9NVE7 773 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 ARHGAP28Q9P2N2 729 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 NOC2LQ9Y3T9 749 aaKnown RBP17.66■□□□□ 0.42
GPC1-207ENST00000466624 CCDC169A6NNP5 214 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 TRAK2O60296 914 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 MBD3O95983 291 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 IDEP14735 1019 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 PTMSP20962 102 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 MBTD1Q05BQ5 628 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 EHHADHQ08426 723 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 DPYDQ12882 1025 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 PAK2Q13177 524 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 FAM187BQ17R55 369 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 VWCEQ96DN2 955 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 ZNF668Q96K58 619 aaPredicted RBP17.65■□□□□ 0.42
GPC1-207ENST00000466624 PRIMPOLQ96LW4 560 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 FIZ1Q96SL8 496 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
GPC1-207ENST00000466624 BLZF1Q9H2G9 400 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 TMEM134Q9H6X4 195 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 AGO3Q9H9G7 860 aaKnown RBP17.65■□□□□ 0.42
GPC1-207ENST00000466624 ERVK-5Q9HDB9 667 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 ADGRA3Q8IWK6 1321 aa17.65■□□□□ 0.42
GPC1-207ENST00000466624 CEP290O15078 2479 aa17.64■□□□□ 0.42
GPC1-207ENST00000466624 KLRC4O43908 158 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 COASYQ13057 564 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 HERC4Q5GLZ8 1057 aaPredicted RBP17.64■□□□□ 0.41
GPC1-207ENST00000466624 CNKSR3Q6P9H4 555 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 SFR1Q86XK3 245 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 TMEM161BQ8NDZ6 487 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 SEPT8Q92599 483 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 FTHL17Q9BXU8 183 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 OSBPL7Q9BZF2 842 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 CCDC113Q9H0I3 377 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 FZD8Q9H461 694 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 ZHX3Q9H4I2 956 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 MINDY3Q9H8M7 445 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 PRMT7Q9NVM4 692 aaPredicted RBP17.64■□□□□ 0.41
GPC1-207ENST00000466624 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
GPC1-207ENST00000466624 H0YGN5 161 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 INO80B-WBP1J3KQ70 363 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 CASP1P29466 404 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 AXLP30530 894 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 CD52P31358 61 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 MAGEA10P43363 369 aaPredicted RBP17.63■□□□□ 0.41
GPC1-207ENST00000466624 ALCAMQ13740 583 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 PSRC1Q6PGN9 363 aaPredicted RBP17.63■□□□□ 0.41
GPC1-207ENST00000466624 DEFB128Q7Z7B8 93 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 DBF4BQ8NFT6 615 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 SPATA20Q8TB22 786 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 HVCN1Q96D96 273 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 ST3GAL5Q9UNP4 418 aa17.63■□□□□ 0.41
GPC1-207ENST00000466624 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.62■□□□□ 0.41
GPC1-207ENST00000466624 K7ENM7 598 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 K7ERI5 159 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 SLC16A4O15374 487 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 EFCAB14O75071 495 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 RPN1P04843 607 aaKnown RBP17.62■□□□□ 0.41
GPC1-207ENST00000466624 ACTN1P12814 892 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 GTF2BQ00403 316 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 PSMD2Q13200 908 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 KCNB1Q14721 858 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 MAPK6Q16659 721 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 AMHR2Q16671 573 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 ZNF720Q7Z2F6 126 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 HAUS6Q7Z4H7 955 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 GPT2Q8TD30 523 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
GPC1-207ENST00000466624 GSDMAQ96QA5 445 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 GDF15Q99988 308 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 KIFC3Q9BVG8 833 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 STRA6Q9BX79 667 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 CHST12Q9NRB3 414 aa17.62■□□□□ 0.41
GPC1-207ENST00000466624 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 ACKR2O00590 384 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 CSDE1O75534 798 aaKnown RBP17.61■□□□□ 0.41
GPC1-207ENST00000466624 PPP1R37O75864 691 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 BAIAP3O94812 1187 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 ERLIN2O94905 339 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 RHOBTB3O94955 611 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 SMC2O95347 1197 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 PRKCBP05771 671 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 NFX1Q12986 1120 aaKnown RBP17.61■□□□□ 0.41
GPC1-207ENST00000466624 PNOCQ13519 176 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 FAM26FQ5R3K3 315 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 C16orf59Q7L2K0 433 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 CLSTN2Q9H4D0 955 aa17.61■□□□□ 0.41
GPC1-207ENST00000466624 MRPL44Q9H9J2 332 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms