RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SUGCTQ9HAC7 445 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 GP6Q9HCN6 339 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 KCNMB3Q9NPA1 279 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZBTB40Q9NUA8 1239 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PCMTD2Q9NV79 361 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CTNNAL1Q9UBT7 734 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 HESX1Q9UBX0 185 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TPX2Q9ULW0 747 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SPO11Q9Y5K1 396 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 N6AMT1Q9Y5N5 214 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SLC4A7Q9Y6M7 1214 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MAGI3Q5TCQ9 1506 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 UBN2Q6ZU65 1347 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 INO80Q9ULG1 1556 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 TCRBV16S1A1N1A0A5B0 115 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 BLACEA4D250 179 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CFAP69A5D8W1 941 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC69A6NI79 296 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMEM110-MUSTN1A8MSY1 372 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ANKRD65E5RJM6 399 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 DLL1O00548 723 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CEP104O60308 925 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 BRINP1O60477 761 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF189O75820 626 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 LRIG2O94898 1065 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 WISP1O95388 367 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GHRP10912 638 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GNAT1P11488 350 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 DESP17661 470 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 NOS3P29474 1203 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 KRT9P35527 623 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 IGFALSP35858 605 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GNALP38405 381 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 SCNN1BP51168 640 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 NEK4P51957 841 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF132P52740 706 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GFRA1P56159 465 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 MAP4K2Q12851 820 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 BYSLQ13895 437 aaKnown RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF460Q14592 562 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CASP8Q14790 479 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 NAA25Q14CX7 972 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 SPCS2Q15005 226 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 SF1Q15637 639 aaKnown RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CNGA3Q16281 694 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 DUOXA2Q1HG44 320 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC92Q53HC0 331 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 DAB2IPQ5VWQ8 1189 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GTF2IRD2BQ6EKJ0 949 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 IQCEQ6IPM2 695 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCSAPQ6IQ19 270 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 NEPROQ6NW34 567 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 POMZP3Q6PJE2 187 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATF7IPQ6VMQ6 1270 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 NCCRP1Q6ZVX7 275 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GTF2IRD2Q86UP8 949 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 FBXO11Q86XK2 927 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 PEX5LQ8IYB4 626 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC13Q8IYE1 715 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CRACR2BQ8N4Y2 399 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 MFSD2AQ8NA29 543 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 SPC24Q8NBT2 197 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 RASSF8Q8NHQ8 419 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 DNAJB8Q8NHS0 232 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 XAGE3Q8WTP9 111 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 WFDC12Q8WWY7 111 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 TAF4BQ92750 862 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 GOLGA1Q92805 767 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 PTPRN2Q92932 1015 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF570Q96NI8 536 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRAPPC9Q96Q05 1148 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 SMC6Q96SB8 1091 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 SEZ6LQ9BYH1 1024 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRIM8Q9BZR9 551 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 MRPL46Q9H2W6 279 aaKnown RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 DCTPP1Q9H773 170 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 HELLSQ9NRZ9 838 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 MYO1AQ9UBC5 1043 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CGGBP1Q9UFW8 167 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 PUF60Q9UHX1 559 aaKnown RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 AP4E1Q9UPM8 1137 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 CEP131Q9UPN4 1083 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 ITM2BQ9Y287 266 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 BZW2Q9Y6E2 419 aaKnown RBP3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 KIF24Q5T7B8 1368 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 KIAA0232Q92628 1395 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 MAGI2Q86UL8 1455 aa3.98□□□□□ -1.77
HMGB3P8-201ENST00000449709 NPHP3Q7Z494 1330 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 MYPNQ86TC9 1320 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TTC21AQ8NDW8 1320 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 PREX1Q8TCU6 1659 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 OVOS2A0A0G2JMS6 1433 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 OVOS2A0A0J9YW53 1432 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 OVOS2Q6IE36 1432 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ABCC6O95255 1503 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ABCA9Q8IUA7 1624 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 C5orf60A6NFR6 353 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZSCAN12O43309 604 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 AKAP10O43572 662 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms