RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CRB1P82279 1406 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 MTFR1Q15390 333 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 VWA3BQ502W6 1294 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 KLHDC10Q6PID8 442 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 NEK10Q6ZWH5 1172 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 SH3RF1Q7Z6J0 888 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 GIPC3Q8TF64 312 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 CKAP2Q8WWK9 683 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 PRPF18Q99633 342 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 KIAA1683Q9H0B3 1180 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 RPAP3Q9H6T3 665 aaPredicted RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 PSTPIP2Q9H939 334 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 METTL5Q9NRN9 209 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 GINM1Q9NU53 330 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 TCP11L1Q9NUJ3 509 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 DDX18Q9NVP1 670 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 THEGQ9P2T0 379 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 MYO5AQ9Y4I1 1855 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 CPS1P31327 1500 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 IGHMBP2P38935 993 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 MXI1P50539 228 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 FIGNQ5HY92 759 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 DHRS4L2Q6PKH6 230 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 RBM44Q6ZP01 1051 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 FAM47EQ6ZV65 393 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 AACSQ86V21 672 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CCDC110Q8TBZ0 833 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 HPS3Q969F9 1004 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 ERP27Q96DN0 273 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 MAELQ96JY0 434 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 AZI2Q9H6S1 392 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 PARVGQ9HBI0 331 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 LRRC4CQ9HCJ2 640 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 ZDHHC7Q9NXF8 308 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 FBXO2Q9UK22 296 aaPredicted RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 H7C1D1 291 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 DDX3XO00571 662 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CPLX1O14810 134 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 MAPK13O15264 365 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 OR6B1O95007 311 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CCDC159P0C7I6 412 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 SRGNP10124 158 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 BCAP31P51572 246 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 PAK1Q13153 545 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 TRIM29Q14134 588 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 SEPT6Q14141 434 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 NR1D2Q14995 579 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 SPCS2Q15005 226 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 MYLK3Q32MK0 819 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 ANKDD1AQ495B1 522 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 BORAQ6PGQ7 559 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 IZUMO2Q6UXV1 221 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CCDC127Q96BQ5 260 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 LRRC37BQ96QE4 947 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 PABPC3Q9H361 631 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 DNAJB4Q9UDY4 337 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 COQ6Q9Y2Z9 468 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 FAM208AQ9UK61 1670 aaKnown RBP11.49□□□□□ -0.57
LINC00342-202ENST00000448494 CACNA1FO60840 1977 aa11.49□□□□□ -0.57
LINC00342-202ENST00000448494 A8MXQ7 604 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 TMEM114B3SHH9 223 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 CLASP2O75122 1294 aaKnown RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 T-ENOLP0DO92 83 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 SCG2P13521 617 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 ACADSBP45954 432 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 IFI35P80217 286 aaPredicted RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 COG7P83436 770 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 TGFBIQ15582 683 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 BOLA3Q53S33 107 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 ACSBG2Q5FVE4 666 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 FYB2Q5VWT5 728 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 DENND2CQ68D51 928 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 LSMEM2Q8N112 164 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 CRNKL1Q9BZJ0 848 aaKnown RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 CEP44Q9C0F1 390 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 KLHL4Q9C0H6 718 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 RBM38Q9H0Z9 239 aaKnown RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 CUEDC2Q9H467 287 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 VTA1Q9NP79 307 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 SAR1AQ9NR31 198 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 AGPAT5Q9NUQ2 364 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 CHPF2Q9P2E5 772 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 HERC5Q9UII4 1024 aaKnown RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms