RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CLIP3Q96DZ5 547 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 WDR92Q96MX6 357 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 FDXACB1Q9BRP7 624 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 SOX7Q9BT81 388 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 MAGEL2Q9UJ55 1249 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 CDC42EP3Q9UKI2 254 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 SMG5Q9UPR3 1016 aaKnown RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 VWA7Q9Y334 891 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 SH3D21A4FU49 640 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 FSBPO95073 299 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 HMGCRP04035 888 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 KRT1P04264 644 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 HSPA6P17066 643 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 LPOP22079 712 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 WASP42768 502 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 TBX4P57082 545 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 SESN2P58004 480 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 MGAT5Q09328 741 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 EPM2AIP1Q7L775 607 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 REXO1L1PQ8IX06 675 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 GLB1L3Q8NCI6 653 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 BHLHE22Q8NFJ8 381 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZNF526Q8TF50 670 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 UBE2Q2Q8WVN8 375 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 NKD2Q969F2 451 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 COA7Q96BR5 231 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLC38A3Q99624 504 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 GREM2Q9H772 168 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 CD320Q9NPF0 282 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 NMRK2Q9NPI5 230 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 SAP30BPQ9UHR5 308 aaKnown RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 DNAI1Q9UI46 699 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 SCOCQ9UIL1 159 aa5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 EIF4G1Q04637 1599 aaKnown RBP5.66□□□□□ -1.5
HMGB1P16-201ENST00000447155 OFD1O75665 1012 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 TSPAN15O95858 294 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 C1QTNF9P0C862 333 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 MCAMP43121 646 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 SARSP49591 514 aaKnown RBP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 STAT5BP51692 787 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 KCNQ1P51787 676 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 MEF2AQ02078 507 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 HLTFQ14527 1009 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 GJC2Q5T442 439 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 IFIT1BQ5T764 474 aaKnown RBP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 TRIM68Q6AZZ1 485 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 KLHDC10Q6PID8 442 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 FAM180AQ6UWF9 173 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 Q6ZUG5 572 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 GFM2Q969S9 779 aaKnown RBP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 AJUBAQ96IF1 538 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADI1Q9BV57 179 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 KATNBL1Q9H079 304 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 TMEM168Q9H0V1 697 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 RBM12Q9NTZ6 932 aaKnown RBP5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 SERPINB13Q9UIV8 391 aa5.65□□□□□ -1.5
HMGB1P16-201ENST00000447155 CEP162Q5TB80 1403 aa5.65□□□□□ -1.51
HMGB1P16-201ENST00000447155 BAZ1AQ9NRL2 1556 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 A0A1W2PR48 441 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 ERC2O15083 957 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 DAPK3O43293 454 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 DTNBO60941 627 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 LY86O95711 162 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 POU2F2P09086 479 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 GAAP10253 952 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 CD69Q07108 199 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 UAP1L1Q3KQV9 507 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 RTKN2Q8IZC4 609 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 UNC5BQ8IZJ1 945 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 DACT3Q96B18 629 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 LRGUKQ96M69 825 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 CARD11Q9BXL7 1154 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 ANLNQ9NQW6 1124 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 RCAN3Q9UKA8 241 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 RNF114Q9Y508 228 aa5.64□□□□□ -1.51
HMGB1P16-201ENST00000447155 VSTM5A8MXK1 200 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 TMEM127O75204 238 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 CYP1A1P04798 512 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 LTA4HP09960 611 aaKnown RBP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 HNRNPLP14866 589 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 PDCP20941 246 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 GNALP38405 381 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 MEOX1P50221 254 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 LINC00310P59036 64 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 KCNA10Q16322 511 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 FAM26FQ5R3K3 315 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 CCSAPQ6IQ19 270 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 LARP4Q71RC2 724 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 CATIPQ7Z7H3 387 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 CARFQ8N187 725 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 KLHL36Q8N4N3 616 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 POU5F2Q8N7G0 328 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 GPR156Q8NFN8 814 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 NRG4Q8WWG1 115 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms