RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.56■□□□□ 0.88
SEMA3D-202ENST00000444867 SLC45A1Q9Y2W3 748 aa20.56■□□□□ 0.88
SEMA3D-202ENST00000444867 V9GYY5 206 aaPredicted RBP20.56■□□□□ 0.88
SEMA3D-202ENST00000444867 ATP8B3O60423 1300 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 GSTTP1A0A1W2PQM5 241 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 RRP9O43818 475 aaKnown RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 TACC1O75410 805 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 FERP16591 822 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 ATP4AP20648 1035 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 RFC5P40937 340 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 POLGP54098 1239 aaPredicted RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 ERVK-9P63128 1117 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 AMPD2Q01433 879 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 GFPT1Q06210 699 aaPredicted RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 EMC2Q15006 297 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 ERCC6LQ2NKX8 1250 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 CBWD6Q4V339 395 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 CBWD3Q5JTY5 395 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 CBWD5Q5RIA9 395 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 PAPD7Q5XG87 772 aaKnown RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 IQCEQ6IPM2 695 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 MORC4Q8TE76 937 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 STK33Q9BYT3 514 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 INTS2Q9H0H0 1204 aaKnown RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 POLR3FQ9H1D9 316 aaPredicted RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 DHX33Q9H6R0 707 aaKnown RBP20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 TFR2Q9UP52 801 aa20.55■□□□□ 0.88
SEMA3D-202ENST00000444867 GFPT2O94808 682 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 TRIM49P0CI25 452 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 TRIM49CP0CI26 452 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 STAT1P42224 750 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 FKBP1BP68106 108 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 Q3C1V9 767 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 RNF10Q8N5U6 811 aaKnown RBP20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 SEPT1Q8WYJ6 367 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 FAM167AQ96KS9 214 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 FGD4Q96M96 766 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 ARHGAP28Q9P2N2 729 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 CLEC11AQ9Y240 323 aa20.54■□□□□ 0.88
SEMA3D-202ENST00000444867 TISP43B9A030 160 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 SORBS3O60504 671 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 GGPS1O95749 300 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 CNGA1P29973 690 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 BRDTQ58F21 947 aaPredicted RBP20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 RSRC2Q7L4I2 434 aaKnown RBP20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 TRAPPC11Q7Z392 1133 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 RDH13Q8NBN7 331 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 GOLGA1Q92805 767 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 PDCL3Q9H2J4 239 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 APEX2Q9UBZ4 518 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 ANKRD63C9JTQ0 380 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 CCDC172P0C7W6 258 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 CETPP11597 493 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 GARTP22102 1010 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 ARID5AQ03989 594 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 USP37Q86T82 979 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 VPS36Q86VN1 386 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 FBXL18Q96ME1 805 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 ALS2CR12Q96Q35 445 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 PORCNQ9H237 461 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 MLXIPQ9HAP2 919 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 DDX41Q9UJV9 622 aaKnown RBP20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 USP20Q9Y2K6 914 aa20.53■□□□□ 0.88
SEMA3D-202ENST00000444867 EMSYQ7Z589 1322 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 PLXNA1Q9UIW2 1896 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 MACROD2A1Z1Q3 448 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 PGK2P07205 417 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 NAMPTP43490 491 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 STAT5BP51692 787 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 CCNA1P78396 465 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 TARBP2Q15633 366 aaKnown RBP20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 SLC7A3Q8WY07 619 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 RABGGTAQ92696 567 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 CEP89Q96ST8 783 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 PCYT2Q99447 389 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 KIFC3Q9BVG8 833 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 DNAJC12Q9UKB3 198 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 JRKLQ9Y4A0 524 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 SAR1BQ9Y6B6 198 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 DUSP10Q9Y6W6 482 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 PLXNB2O15031 1838 aa20.52■□□□□ 0.88
SEMA3D-202ENST00000444867 ADGRA3Q8IWK6 1321 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 A0A087X0T9 212 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 ASB14A6NK59 587 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 FAM228BP0C875 321 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 ADSSP30520 456 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 SOX5P35711 763 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 ARL2P36404 184 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 GTF2A2P52657 109 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 SOX10P56693 466 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 PTK2Q05397 1052 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 SNRNP35Q16560 246 aaKnown RBP20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 LMO3Q8TAP4 145 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 TMC2Q8TDI7 906 aa20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 AJAP1Q9UKB5 411 aaPredicted RBP20.51■□□□□ 0.87
SEMA3D-202ENST00000444867 BTNL10A8MVZ5 291 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms